Ancient DNA analysis

L Orlando, R Allaby, P Skoglund… - Nature reviews …, 2021 - nature.com
Although the first ancient DNA molecules were extracted more than three decades ago, the
first ancient nuclear genomes could only be characterized after high-throughput sequencing …

Yersinia pestis: the natural history of plague

R Barbieri, M Signoli, D Chevé… - Clinical microbiology …, 2020 - Am Soc Microbiol
SUMMARY The Gram-negative bacterium Yersinia pestis is responsible for deadly plague, a
zoonotic disease established in stable foci in the Americas, Africa, and Eurasia. Its …

The source of the Black Death in fourteenth-century central Eurasia

MA Spyrou, L Musralina, GA Gnecchi Ruscone… - Nature, 2022 - nature.com
The origin of the medieval Black Death pandemic (ad 1346–1353) has been a topic of
continuous investigation because of the pandemic's extensive demographic impact and long …

The EnteroBase user's guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity

Z Zhou, NF Alikhan, K Mohamed, Y Fan… - Genome …, 2020 - genome.cshlp.org
EnteroBase is an integrated software environment that supports the identification of global
population structures within several bacterial genera that include pathogens. Here, we …

Stone Age Yersinia pestis genomes shed light on the early evolution, diversity, and ecology of plague

A Andrades Valtueña, GU Neumann… - Proceedings of the …, 2022 - National Acad Sciences
The bacterial pathogen Yersinia pestis gave rise to devastating outbreaks throughout
human history, and ancient DNA evidence has shown it afflicted human populations as far …

The Justinianic Plague: an inconsequential pandemic?

L Mordechai, M Eisenberg… - Proceedings of the …, 2019 - National Acad Sciences
Existing mortality estimates assert that the Justinianic Plague (circa 541 to 750 CE) caused
tens of millions of deaths throughout the Mediterranean world and Europe, hel** to end …

Phylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomes

MA Spyrou, M Keller, RI Tukhbatova, CL Scheib… - Nature …, 2019 - nature.com
The second plague pandemic, caused by Yersinia pestis, devastated Europe and the
nearby regions between the 14th and 18th centuries AD. Here we analyse human remains …

Rejecting catastrophe: The case of the Justinianic Plague

L Mordechai, M Eisenberg - Past & Present, 2019 - academic.oup.com
Recent research has increasingly argued that the Justinianic Plague was an unparallelled
demographic catastrophe which killed half the population of the Mediterranean world and …

A 5,000-year-old hunter-gatherer already plagued by Yersinia pestis

J Susat, H Lübke, A Immel, U Brinker, A Macāne… - Cell reports, 2021 - cell.com
Summary A 5,000-year-old Yersinia pestis genome (RV 2039) is reconstructed from a hunter-
fisher-gatherer (5300–5050 cal BP) buried at Riņņukalns, Latvia. RV 2039 is the first in a …

Rickettsia-Host-Tick Interactions: Knowledge Advances and Gaps

HK Kim - Infection and Immunity, 2022 - Am Soc Microbiol
Ticks are hematophagous ectoparasites capable of transmitting multiple human pathogens.
Environmental changes have supported the expansion of ticks into new geographical areas …