Fungal community analysis by high‐throughput sequencing of amplified markers–a user's guide
Novel high‐throughput sequencing methods outperform earlier approaches in terms of
resolution and magnitude. They enable identification and relative quantification of …
resolution and magnitude. They enable identification and relative quantification of …
[HTML][HTML] Lineages of ectomycorrhizal fungi revisited: foraging strategies and novel lineages revealed by sequences from belowground
In the fungal kingdom, the ectomycorrhizal (EcM) symbiosis has evolved independently in
multiple groups that are referred to as lineages. A growing number of molecular studies in …
multiple groups that are referred to as lineages. A growing number of molecular studies in …
FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles
The cryptic lifestyle of most fungi necessitates molecular identification of the guild in
environmental studies. Over the past decades, rapid development and affordability of …
environmental studies. Over the past decades, rapid development and affordability of …
Towards a unified paradigm for sequence‐based identification of fungi
The nuclear ribosomal internal transcribed spacer (ITS) region is the formal fungal barcode
and in most cases the marker of choice for the exploration of fungal diversity in …
and in most cases the marker of choice for the exploration of fungal diversity in …
Phylogenetic reference data for systematics and phylotaxonomy of arbuscular mycorrhizal fungi from phylum to species level
Although the molecular phylogeny, evolution and biodiversity of arbuscular mycorrhizal
fungi (AMF) are becoming clearer, phylotaxonomically reliable sequence data are still …
fungi (AMF) are becoming clearer, phylotaxonomically reliable sequence data are still …
High-throughput sequencing and metagenomics: moving forward in the culture-independent analysis of food microbial ecology
D Ercolini - Applied and environmental microbiology, 2013 - Am Soc Microbiol
Following recent trends in environmental microbiology, food microbiology has benefited
from the advances in molecular biology and adopted novel strategies to detect, identify, and …
from the advances in molecular biology and adopted novel strategies to detect, identify, and …
Fungal DNA barcoding
J Xu - Genome, 2016 - cdnsciencepub.com
Fungi are ubiquitous in both natural and human-made environments. They play important
roles in the health of plants, animals, and humans, and in broad ecosystem functions. Thus …
roles in the health of plants, animals, and humans, and in broad ecosystem functions. Thus …
Forgotten fungi—the gut mycobiome in human health and disease
The human body is home to a complex and diverse microbial ecosystem that plays a central
role in host health. This includes a diversity of fungal species that is collectively referred to …
role in host health. This includes a diversity of fungal species that is collectively referred to …
Towards global patterns in the diversity and community structure of ectomycorrhizal fungi
Global species richness patterns of soil micro‐organisms remain poorly understood
compared to macro‐organisms. We use a global analysis to disentangle the global …
compared to macro‐organisms. We use a global analysis to disentangle the global …
A comprehensive, automatically updated fungal ITS sequence dataset for reference-based chimera control in environmental sequencing efforts
The nuclear ribosomal internal transcribed spacer (ITS) region is the most commonly chosen
genetic marker for the molecular identification of fungi in environmental sequencing and …
genetic marker for the molecular identification of fungi in environmental sequencing and …