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[HTML][HTML] Network resilience
Many systems on our planet shift abruptly and irreversibly from the desired state to an
undesired state when forced across a “tip** point”. Some examples are mass extinctions …
undesired state when forced across a “tip** point”. Some examples are mass extinctions …
Predictive biology: modelling, understanding and harnessing microbial complexity
Predictive biology is the next great chapter in synthetic and systems biology, particularly for
microorganisms. Tasks that once seemed infeasible are increasingly being realized such as …
microorganisms. Tasks that once seemed infeasible are increasingly being realized such as …
Precise, automated control of conditions for high-throughput growth of yeast and bacteria with eVOLVER
Precise control over microbial cell growth conditions could enable detection of minute
phenotypic changes, which would improve our understanding of how genotypes are shaped …
phenotypic changes, which would improve our understanding of how genotypes are shaped …
Robust, linear correlations between growth rates and β-lactam–mediated lysis rates
It is widely acknowledged that faster-growing bacteria are killed faster by β-lactam
antibiotics. This notion serves as the foundation for the concept of bacterial persistence …
antibiotics. This notion serves as the foundation for the concept of bacterial persistence …
Bacterial growth: global effects on gene expression, growth feedback and proteome partition
Highlights•Genes and genetic circuits exhibit growth-rate dependence.•Growth rate
dependence reflects coupling of gene expression and physiological state of the cell.•Several …
dependence reflects coupling of gene expression and physiological state of the cell.•Several …
Phenotypic heterogeneity promotes adaptive evolution
Genetically identical cells frequently display substantial heterogeneity in gene expression,
cellular morphology and physiology. It has been suggested that by rapidly generating a …
cellular morphology and physiology. It has been suggested that by rapidly generating a …
Unraveling non-genetic heterogeneity in cancer with dynamical models and computational tools
Individual cells within an otherwise genetically homogenous population constantly undergo
fluctuations in their molecular state, giving rise to non-genetic heterogeneity. Such diversity …
fluctuations in their molecular state, giving rise to non-genetic heterogeneity. Such diversity …
Salmonella typhimurium intercepts Escherichia coli signaling to enhance antibiotic tolerance
Bacterial communication plays an important role in many population-based phenotypes and
interspecies interactions, including those in host environments. These interspecies …
interspecies interactions, including those in host environments. These interspecies …
Phenotypic switching in gene regulatory networks
Noise in gene expression can lead to reversible phenotypic switching. Several experimental
studies have shown that the abundance distributions of proteins in a population of isogenic …
studies have shown that the abundance distributions of proteins in a population of isogenic …
Role of network-mediated stochasticity in mammalian drug resistance
A major challenge in biology is that genetically identical cells in the same environment can
display gene expression stochasticity (noise), which contributes to bet-hedging, drug …
display gene expression stochasticity (noise), which contributes to bet-hedging, drug …