[HTML][HTML] Ethylene signaling in plants

BM Binder - Journal of Biological Chemistry, 2020 - Elsevier
Ethylene is a gaseous phytohormone and the first of this hormone class to be discovered. It
is the simplest olefin gas and is biosynthesized by plants to regulate plant development …

Chloroplast genomes: diversity, evolution, and applications in genetic engineering

H Daniell, CS Lin, M Yu, WJ Chang - Genome biology, 2016 - Springer
Chloroplasts play a crucial role in sustaining life on earth. The availability of over 800
sequenced chloroplast genomes from a variety of land plants has enhanced our …

BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein database

T Brůna, KJ Hoff, A Lomsadze, M Stanke… - NAR genomics and …, 2021 - academic.oup.com
The task of eukaryotic genome annotation remains challenging. Only a few genomes could
serve as standards of annotation achieved through a tremendous investment of human …

Exploring machine learning: a scientometrics approach using bibliometrix and VOSviewer

DO Oyewola, EG Dada - SN Applied Sciences, 2022 - Springer
Abstract Machine Learning has found application in solving complex problems in different
fields of human endeavors such as intelligent gaming, automated transportation, cyborg …

Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants

X Qiao, Q Li, H Yin, K Qi, L Li, R Wang, S Zhang… - Genome biology, 2019 - Springer
Background The sharp increase of plant genome and transcriptome data provide valuable
resources to investigate evolutionary consequences of gene duplication in a range of taxa …

15 years of GDR: New data and functionality in the Genome Database for Rosaceae

S Jung, T Lee, CH Cheng, K Buble… - Nucleic acids …, 2019 - academic.oup.com
Abstract The Genome Database for Rosaceae (GDR, https://www. rosaceae. org) is an
integrated web-based community database resource providing access to publicly available …

The Rosa genome provides new insights into the domestication of modern roses

O Raymond, J Gouzy, J Just, H Badouin… - Nature …, 2018 - nature.com
Roses have high cultural and economic importance as ornamental plants and in the
perfume industry. We report the rose whole-genome sequencing and assembly and …

InterProScan 5: genome-scale protein function classification

P Jones, D Binns, HY Chang, M Fraser, W Li… - …, 2014 - academic.oup.com
Motivation: Robust large-scale sequence analysis is a major challenge in modern genomic
science, where biologists are frequently trying to characterize many millions of sequences …

Genomic innovation for crop improvement

MW Bevan, C Uauy, BBH Wulff, J Zhou, K Krasileva… - Nature, 2017 - nature.com
Crop production needs to increase to secure future food supplies, while reducing its impact
on ecosystems. Detailed characterization of plant genomes and genetic diversity is crucial …

Widespread natural variation of DNA methylation within angiosperms

CE Niederhuth, AJ Bewick, L Ji, MS Alabady, KD Kim… - Genome biology, 2016 - Springer
Background DNA methylation is an important feature of plant epigenomes, involved in the
formation of heterochromatin and affecting gene expression. Extensive variation of DNA …