Plant pan-genomes are the new reference
Recent years have seen a surge in plant genome sequencing projects and the comparison
of multiple related individuals. The high degree of genomic variation observed led to the …
of multiple related individuals. The high degree of genomic variation observed led to the …
Plant NLR diversity: the known unknowns of pan-NLRomes
Plants and pathogens constantly adapt to each other. As a consequence, many members of
the plant immune system, and especially the intracellular nucleotide-binding site leucine …
the plant immune system, and especially the intracellular nucleotide-binding site leucine …
[HTML][HTML] Pan-genome of wild and cultivated soybeans
Y Liu, H Du, P Li, Y Shen, H Peng, S Liu, GA Zhou… - Cell, 2020 - cell.com
Soybean is one of the most important vegetable oil and protein feed crops. To capture the
entire genomic diversity, it is needed to construct a complete high-quality pan-genome from …
entire genomic diversity, it is needed to construct a complete high-quality pan-genome from …
Graph-based pan-genome reveals structural and sequence variations related to agronomic traits and domestication in cucumber
Structural variants (SVs) represent a major source of genetic diversity and are related to
numerous agronomic traits and evolutionary events; however, their comprehensive …
numerous agronomic traits and evolutionary events; however, their comprehensive …
Pangenomics comes of age: from bacteria to plant and animal applications
The pangenome refers to a collection of genomic sequence found in the entire species or
population rather than in a single individual; the sequence can be core, present in all …
population rather than in a single individual; the sequence can be core, present in all …
Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure
While prokaryotic pan-genomes have been shown to contain many more genes than any
individual organism, the prevalence and functional significance of differentially present …
individual organism, the prevalence and functional significance of differentially present …
Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus
Homoeologous exchanges (HE s) have been shown to generate novel gene combinations
and phenotypes in a range of polyploid species. Gene presence/absence variation (PAV) is …
and phenotypes in a range of polyploid species. Gene presence/absence variation (PAV) is …
Plant pan-genomics comes of age
A pan-genome is the nonredundant collection of genes and/or DNA sequences in a species.
Numerous studies have shown that plant pan-genomes are typically much larger than the …
Numerous studies have shown that plant pan-genomes are typically much larger than the …
DNA methylation and cardiovascular disease in humans: a systematic review and database of known CpG methylation sites
Background Cardiovascular disease (CVD) is the leading cause of death worldwide and
considered one of the most environmentally driven diseases. The role of DNA methylation in …
considered one of the most environmentally driven diseases. The role of DNA methylation in …
Metabolomics and complementary techniques to investigate the plant phytochemical cosmos
Covering: up to 2021 Plants and their associated microbial communities are known to
produce millions of metabolites, a majority of which are still not characterized and are …
produce millions of metabolites, a majority of which are still not characterized and are …