Recent applications of deep learning and machine intelligence on in silico drug discovery: methods, tools and databases

AS Rifaioglu, H Atas, MJ Martin… - Briefings in …, 2019 - academic.oup.com
The identification of interactions between drugs/compounds and their targets is crucial for
the development of new drugs. In vitro screening experiments (ie bioassays) are frequently …

Machine learning models for drug–target interactions: current knowledge and future directions

S D'Souza, KV Prema, S Balaji - Drug Discovery Today, 2020 - Elsevier
Highlights•Chemical descriptors in modeling drug-target interaction.•Modeling approaches
in drug-target interaction prediction.•Machine learning and deep learning models in drug …

CCL-DTI: contributing the contrastive loss in drug–target interaction prediction

A Dehghan, K Abbasi, P Razzaghi, H Banadkuki… - BMC …, 2024 - Springer
Abstract Background The Drug–Target Interaction (DTI) prediction uses a drug molecule and
a protein sequence as inputs to predict the binding affinity value. In recent years, deep …

Drug–target interaction predication via multi-channel graph neural networks

Y Li, G Qiao, K Wang, G Wang - Briefings in Bioinformatics, 2022 - academic.oup.com
Drug–target interaction (DTI) is an important step in drug discovery. Although there are many
methods for predicting drug targets, these methods have limitations in using discrete or …

Supervised graph co-contrastive learning for drug–target interaction prediction

Y Li, G Qiao, X Gao, G Wang - Bioinformatics, 2022 - academic.oup.com
Abstract Motivation Identification of Drug–Target Interactions (DTIs) is an essential step in
drug discovery and repositioning. DTI prediction based on biological experiments is time …

Quantum machine learning algorithms for drug discovery applications

K Batra, KM Zorn, DH Foil, E Minerali… - Journal of chemical …, 2021 - ACS Publications
The growing quantity of public and private data sets focused on small molecules screened
against biological targets or whole organisms provides a wealth of drug discovery relevant …

BINDTI: a bi-directional intention network for drug-target interaction identification based on attention mechanisms

L Peng, X Liu, L Yang, L Liu, Z Bai… - IEEE Journal of …, 2024 - ieeexplore.ieee.org
The identification of drug-target interactions (DTIs) is an essential step in drug discovery. In
vitro experimental methods are expensive, laborious, and time-consuming. Deep learning …

CoaDTI: multi-modal co-attention based framework for drug–target interaction annotation

L Huang, J Lin, R Liu, Z Zheng, L Meng… - Briefings in …, 2022 - academic.oup.com
Motivation The identification of drug–target interactions (DTIs) plays a vital role for in silico
drug discovery, in which the drug is the chemical molecule, and the target is the protein …

Drug–target interaction predictions with multi-view similarity network fusion strategy and deep interactive attention mechanism

W Song, L Xu, C Han, Z Tian, Q Zou - Bioinformatics, 2024 - academic.oup.com
Motivation Accurately identifying the drug–target interactions (DTIs) is one of the crucial
steps in the drug discovery and drug repositioning process. Currently, many computational …

[HTML][HTML] Semi-supervised heterogeneous graph contrastive learning for drug–target interaction prediction

K Yao, X Wang, W Li, H Zhu, Y Jiang, Y Li… - Computers in Biology …, 2023 - Elsevier
Identification of drug–target interactions (DTIs) is an important step in drug discovery and
drug repositioning. In recent years, graph-based methods have attracted great attention and …