[HTML][HTML] Biclustering on expression data: A review

B Pontes, R Giráldez, JS Aguilar-Ruiz - Journal of biomedical informatics, 2015 - Elsevier
Biclustering has become a popular technique for the study of gene expression data,
especially for discovering functionally related gene sets under different subsets of …

Biclustering data analysis: a comprehensive survey

EN Castanho, H Aidos, SC Madeira - Briefings in Bioinformatics, 2024 - academic.oup.com
Biclustering, the simultaneous clustering of rows and columns of a data matrix, has proved
its effectiveness in bioinformatics due to its capacity to produce local instead of global …

Big data analytics in bioinformatics: A machine learning perspective

H Kashyap, HA Ahmed, N Hoque, S Roy… - arxiv preprint arxiv …, 2015 - arxiv.org
Bioinformatics research is characterized by voluminous and incremental datasets and
complex data analytics methods. The machine learning methods used in bioinformatics are …

[HTML][HTML] FG-HFS: A feature filter and group evolution hybrid feature selection algorithm for high-dimensional gene expression data

Z Xu, F Yang, C Tang, H Wang, S Wang, J Sun… - Expert Systems with …, 2024 - Elsevier
High dimensional and small samples characterize gene expression data and contain a large
number of genes unrelated to disease. Feature selection improves the efficiency of disease …

Adaptive fuzzy consensus clustering framework for clustering analysis of cancer data

Z Yu, H Chen, J You, J Liu, HS Wong… - … /ACM transactions on …, 2014 - ieeexplore.ieee.org
Performing clustering analysis is one of the important research topics in cancer discovery
using gene expression profiles, which is crucial in facilitating the successful diagnosis and …

Metaheuristic biclustering algorithms: from state-of-the-art to future opportunities

A José-García, J Jacques, V Sobanski… - ACM Computing …, 2023 - dl.acm.org
Biclustering is an unsupervised machine-learning technique that simultaneously clusters
rows and columns in a data matrix. Over the past two decades, the field of biclustering has …

Impact of metrics on biclustering solution and quality: a review

MDM Noronha, R Henriques, SC Madeira, LE Zárate - Pattern Recognition, 2022 - Elsevier
To understand how subspace clustering algorithms discover distinct bicluster types and how
their effectiveness has been validated, we offer a systematic literature review on available …

Robust classification using ℓ2, 1-norm based regression model

CX Ren, DQ Dai, H Yan - Pattern Recognition, 2012 - Elsevier
A novel classification method using ℓ2, 1-norm based regression is proposed in this paper.
The ℓ2, 1-norm based loss function is robust to outliers or large variations distributed in the …

Double selection based semi-supervised clustering ensemble for tumor clustering from gene expression profiles

Z Yu, H Chen, J You, HS Wong, J Liu… - … /ACM transactions on …, 2014 - ieeexplore.ieee.org
Tumor clustering is one of the important techniques for tumor discovery from cancer gene
expression profiles, which is useful for the diagnosis and treatment of cancer. While different …

Quality measures for gene expression biclusters

B Pontes, R Girldez, JS Aguilar-Ruiz - PloS one, 2015 - journals.plos.org
An noticeable number of biclustering approaches have been proposed proposed for the
study of gene expression data, especially for discovering functionally related gene sets …