Membrane protein structure, function, and dynamics: a perspective from experiments and theory
Membrane proteins mediate processes that are fundamental for the flourishing of biological
cells. Membrane-embedded transporters move ions and larger solutes across membranes; …
cells. Membrane-embedded transporters move ions and larger solutes across membranes; …
Visualization of biomolecular structures: State of the art revisited
Structural properties of molecules are of primary concern in many fields. This report provides
a comprehensive overview on techniques that have been developed in the fields of …
a comprehensive overview on techniques that have been developed in the fields of …
MegaMol—a prototy** framework for particle-based visualization
Visualization applications nowadays not only face increasingly larger datasets, but have to
solve increasingly complex research questions. They often require more than a single …
solve increasingly complex research questions. They often require more than a single …
Modeling in the Time of COVID-19: Statistical and Rule-based Mesoscale Models
We present a new technique for the rapid modeling and construction of scientifically
accurate mesoscale biological models. The resulting 3D models are based on a few 2D …
accurate mesoscale biological models. The resulting 3D models are based on a few 2D …
[HTML][HTML] cellVIEW: a tool for illustrative and multi-scale rendering of large biomolecular datasets
In this article we introduce cellVIEW, a new system to interactively visualize large
biomolecular datasets on the atomic level. Our tool is unique and has been specifically …
biomolecular datasets on the atomic level. Our tool is unique and has been specifically …
CellPAINT: interactive illustration of dynamic mesoscale cellular environments
CellPAINT allows nonexpert users to create interactive mesoscale illustrations that integrate
a variety of biological data. Like popular digital painting software, scenes are created using …
a variety of biological data. Like popular digital painting software, scenes are created using …
Illustrative visualization of molecular reactions using omniscient intelligence and passive agents
M Le Muzic, J Parulek, AK Stavrum… - Computer Graphics …, 2014 - Wiley Online Library
In this paper we propose a new type of a particle systems, tailored for illustrative
visualization purposes, in particular for visualizing molecular reactions in biological …
visualization purposes, in particular for visualizing molecular reactions in biological …
From atoms to cells: Using mesoscale landscapes to construct visual narratives
DS Goodsell, MA Franzen, T Herman - Journal of molecular biology, 2018 - Elsevier
Modeling and visualization of the cellular mesoscale, bridging the nanometer scale of
molecules to the micrometer scale of cells, is being studied by an integrative approach. Data …
molecules to the micrometer scale of cells, is being studied by an integrative approach. Data …
Molecular simulations and visualization: introduction and overview
Here we provide an introduction and overview of current progress in the field of molecular
simulation and visualization, touching on the following topics:(1) virtual and augmented …
simulation and visualization, touching on the following topics:(1) virtual and augmented …
Trends & opportunities in visualization for physiology: A multiscale overview
Combining elements of biology, chemistry, physics, and medicine, the science of human
physiology is complex and multifaceted. In this report, we offer a broad and multiscale …
physiology is complex and multifaceted. In this report, we offer a broad and multiscale …