Hybrid modelling of biological systems: current progress and future prospects
Integrated modelling of biological systems is becoming a necessity for constructing models
containing the major biochemical processes of such systems in order to obtain a holistic …
containing the major biochemical processes of such systems in order to obtain a holistic …
A holonic framework for managing the sustainable supply chain in emerging economies with smart connected metabolism
Since their origins, human societies have integrated into the natural environment, where
social metabolism that identified the interactions between society and nature was …
social metabolism that identified the interactions between society and nature was …
[HTML][HTML] Reliability and efficiency evaluation of a community pharmacy dispensing process using a coloured Petri-net approach
It has been estimated that European customers visit community pharmacies to access
essential primary healthcare around 46 million times every day. Studies of dispensing error …
essential primary healthcare around 46 million times every day. Studies of dispensing error …
Spatial quorum sensing modelling using coloured hybrid Petri nets and simulative model checking
Background Quorum sensing drives biofilm formation in bacteria in order to ensure that
biofilm formation only occurs when colonies are of a sufficient size and density. This spatial …
biofilm formation only occurs when colonies are of a sufficient size and density. This spatial …
Automatic construction of Petri net models for computational simulations of molecular interaction network
X Lin, X Chang, Y Zhang, Z Gao, X Chi - NPJ Systems Biology and …, 2024 - nature.com
Petri nets are commonly applied in modeling biological systems. However, construction of a
Petri net model for complex biological systems is often time consuming, and requires …
Petri net model for complex biological systems is often time consuming, and requires …
A Petri nets-based framework for whole-cell modeling
Whole-cell modeling aims to incorporate all main genes and processes, and their
interactions of a cell in one model. Whole-cell modeling has been regarded as the central …
interactions of a cell in one model. Whole-cell modeling has been regarded as the central …
EB-DEVS: A formal framework for modeling and simulation of emergent behavior in dynamic complex systems
Emergent behavior is a key feature defining a system under study as a complex system.
Simulation has been recognized as the only way to deal with the study of the emergence of …
Simulation has been recognized as the only way to deal with the study of the emergence of …
Modeling and analyzing transmission of infectious diseases using generalized stochastic petri nets
L Peng, P **e, Z Tang, F Liu - Applied Sciences, 2021 - mdpi.com
Some infectious diseases such as COVID-19 have the characteristics of long incubation
period, high infectivity during the incubation period, and carriers with mild or no symptoms …
period, high infectivity during the incubation period, and carriers with mild or no symptoms …
From epidemic to pandemic modelling
We present a methodology for systematically extending epidemic models to multilevel and
multiscale spatio-temporal pandemic ones. Our approach builds on the use of coloured …
multiscale spatio-temporal pandemic ones. Our approach builds on the use of coloured …
[HTML][HTML] Nets-within-nets for modeling emergent patterns in ontogenetic processes
Ontogenesis is the development of an organism from its earliest stage to maturity, including
homeostasis maintenance throughout adulthood despite environmental perturbations …
homeostasis maintenance throughout adulthood despite environmental perturbations …