Phase transitions of associative biomacromolecules

RV Pappu, SR Cohen, F Dar, M Farag, M Kar - Chemical reviews, 2023 - ACS Publications
Multivalent proteins and nucleic acids, collectively referred to as multivalent associative
biomacromolecules, provide the driving forces for the formation and compositional …

Molecular crowding: the history and development of a scientific paradigm

C Alfano, Y Fichou, K Huber, M Weiss, E Spruijt… - Chemical …, 2024 - ACS Publications
It is now generally accepted that macromolecules do not act in isolation but “live” in a
crowded environment, that is, an environment populated by numerous different molecules …

[HTML][HTML] Organization of chromatin by intrinsic and regulated phase separation

BA Gibson, LK Doolittle, MWG Schneider, LE Jensen… - Cell, 2019 - cell.com
Eukaryotic chromatin is highly condensed but dynamically accessible to regulation and
organized into subdomains. We demonstrate that reconstituted chromatin undergoes …

[HTML][HTML] Liquid–liquid phase separation in crowded environments

AAM André, E Spruijt - International Journal of Molecular Sciences, 2020 - mdpi.com
Biomolecular condensates play a key role in organizing cellular fluids such as the cytoplasm
and nucleoplasm. Most of these non-membranous organelles show liquid-like properties …

Histone modifications regulate chromatin compartmentalization by contributing to a phase separation mechanism

L Wang, Y Gao, X Zheng, C Liu, S Dong, R Li, G Zhang… - Molecular cell, 2019 - cell.com
Eukaryotic chromosomes contain compartments of various functions, which are marked by
and enriched with specific histone modifications. However, the molecular mechanisms by …

Fundamental aspects of phase-separated biomolecular condensates

HX Zhou, D Kota, S Qin, R Prasad - Chemical Reviews, 2024 - ACS Publications
Biomolecular condensates, formed through phase separation, are upending our
understanding in much of molecular, cell, and developmental biology. There is an urgent …

Post-translational modifications in liquid-liquid phase separation: a comprehensive review

J Li, M Zhang, W Ma, B Yang, H Lu, F Zhou… - Molecular …, 2022 - Springer
Liquid-liquid phase separation (LLPS) has received significant attention in recent biological
studies. It refers to a phenomenon that biomolecule exceeds the solubility, condensates and …

Biological phase separation: cell biology meets biophysics

T Yoshizawa, RS Nozawa, TZ Jia, T Saio, E Mori - Biophysical reviews, 2020 - Springer
Progress in development of biophysical analytic approaches has recently crossed paths with
macromolecule condensates in cells. These cell condensates, typically termed liquid-like …

Liquid-liquid phase separation (LLPS) in DNA and chromatin systems from the perspective of colloid physical chemistry

L Nordenskiöld, X Shi, N Korolev, L Zhao, Z Zhai… - Advances in Colloid and …, 2024 - Elsevier
DNA is a highly charged polyelectrolyte and is prone to associative phase separation driven
by the presence of multivalent cations, charged surfactants, proteins, polymers and colloids …

Angle between DNA linker and nucleosome core particle regulates array compaction revealed by individual-particle cryo-electron tomography

M Zhang, C Díaz-Celis, J Liu, J Tao, PD Ashby… - Nature …, 2024 - nature.com
The conformational dynamics of nucleosome arrays generate a diverse spectrum of
microscopic states, posing challenges to their structural determination. Leveraging …