Building regulatory landscapes reveals that an enhancer can recruit cohesin to create contact domains, engage CTCF sites and activate distant genes

NJ Rinzema, K Sofiadis, SJD Tjalsma… - Nature Structural & …, 2022 - nature.com
Developmental gene expression is often controlled by distal regulatory DNA elements called
enhancers. Distant enhancer action is restricted to structural chromosomal domains that are …

Expression of mutant Asxl1 perturbs hematopoiesis and promotes susceptibility to leukemic transformation

R Nagase, D Inoue, A Pastore, T Fu**o… - Journal of Experimental …, 2018 - rupress.org
Additional sex combs like 1 (ASXL1) is frequently mutated in myeloid malignancies and
clonal hematopoiesis of indeterminate potential (CHIP). Although loss of ASXL1 promotes …

Transcription factories in the context of the nuclear and genome organization

SV Razin, AA Gavrilov, A Pichugin… - Nucleic acids …, 2011 - academic.oup.com
In the eukaryotic nucleus, genes are transcribed in transcription factories. In the present
review, we re-evaluate the models of transcription factories in the light of recent and older …

The Hbo1-Brd1/Brpf2 complex is responsible for global acetylation of H3K14 and required for fetal liver erythropoiesis

Y Mishima, S Miyagi, A Saraya… - Blood, The Journal …, 2011 - ashpublications.org
The histone acetyltransferases (HATs) of the MYST family include TIP60, HBO1,
MOZ/MORF, and MOF and function in multisubunit protein complexes. Bromodomain …

Erythroid development in the mammalian embryo

MH Baron, A Vacaru, J Nieves - Blood Cells, Molecules, and Diseases, 2013 - Elsevier
Erythropoiesis is the process by which progenitors for red blood cells are produced and
terminally differentiate. In all vertebrates, two morphologically distinct erythroid lineages …

Regulation of liver regeneration and hepatocarcinogenesis by suppressor of cytokine signaling 3

KJ Riehle, JS Campbell, RS McMahan… - The Journal of …, 2008 - rupress.org
Suppressor of cytokine signaling 3 (SOCS3) down-regulates several signaling pathways in
multiple cell types, and previous data suggest that SOCS3 may shut off cytokine activation at …

AP-1 subunits converge promiscuously at enhancers to potentiate transcription

J Seo, DD Koçak, LC Bartelt, CA Williams… - Genome …, 2021 - genome.cshlp.org
The AP-1 transcription factor (TF) dimer contributes to many biological processes and
environmental responses. AP-1 can be composed of many interchangeable subunits …

Global gene expression analysis of human erythroid progenitors

AT Merryweather-Clarke, A Atzberger… - Blood, The Journal …, 2011 - ashpublications.org
Understanding the pattern of gene expression during erythropoiesis is crucial for a synthesis
of erythroid developmental biology. Here, we isolated 4 distinct populations at successive …

Mammalian-wide interspersed repeat (MIR)-derived enhancers and the regulation of human gene expression

D J**go, AB Conley, J Wang, L Mariño-Ramírez… - Mobile DNA, 2014 - Springer
Background Mammalian-wide interspersed repeats (MIRs) are the most ancient family of
transposable elements (TEs) in the human genome. The deep conservation of MIRs initially …

Hemin-mediated regulation of an antioxidant-responsive element of the human ferritin H gene and role of Ref-1 during erythroid differentiation of K562 cells

K Iwasaki, EL MacKenzie, K Hailemariam… - … and cellular biology, 2006 - Am Soc Microbiol
An effective utilization of intracellular iron is a prerequisite for erythroid differentiation and
hemoglobinization. Ferritin, consisting of 24 subunits of H and L, plays a crucial role in iron …