[HTML][HTML] Molecular docking: current advances and challenges

FD Prieto-Martínez, M Arciniega… - … en ciencias químico …, 2018 - scielo.org.mx
Automated molecular docking aims at predicting the possible interactions between two
molecules. This method has proven useful in medicinal chemistry and drug discovery …

[HTML][HTML] Acoplamiento molecular: avances recientes y retos

FD Prieto-Martínez, M Arciniega… - … en Ciencias Químico …, 2019 - medigraphic.com
El acoplamiento molecular automatizado tiene como objetivo proponer un modelo de unión
entre dos moléculas. Este método ha sido útil en química farmacéutica y en el …

Insights into the molecular mechanisms of protein‐ligand interactions by molecular docking and molecular dynamics simulation: a case of oligopeptide binding protein

Y Fu, J Zhao, Z Chen - Computational and mathematical …, 2018 - Wiley Online Library
Protein‐ligand interactions are a necessary prerequisite for signal transduction,
immunoreaction, and gene regulation. Protein‐ligand interaction studies are important for …

Multiobjective trajectory optimization with a cutting and padding encoding strategy for single-UAV-assisted mobile edge computing system

J Lin, L Pan - Swarm and Evolutionary Computation, 2022 - Elsevier
Mobile edge computing (MEC) is used to provide IT services environment and cloud
computing capabilities at the edge of the network. As the technology of unmanned aerial …

An improved Simulated Annealing algorithm based on ancient metallurgy techniques

B Morales-Castañeda, D Zaldívar, E Cuevas… - Applied Soft …, 2019 - Elsevier
Simulated Annealing (SA) is a single-solution-based metaheuristic technique based on the
annealing process in metallurgy. It is also one of the best-known metaheuristic algorithms …

Chemical composition and acetylcholinesterase inhibitory potential, in silico, of Myrciaria floribunda (H. West ex Willd.) O. Berg fruit peel essential oil

DC da Silva Barbosa, VN Holanda… - Industrial crops and …, 2020 - Elsevier
Essential oils (EOs) are volatile compounds obtained from aromatic plants that can act as
modulators of neurological systems. Several neurodegenerative diseases have been …

Improving the artificial bee colony algorithm with a proprietary estimation of distribution mechanism for protein–ligand docking

S Song, C Tang, Z Song, J Qu, X Chen - Applied Soft Computing, 2024 - Elsevier
The protein–ligand docking problem plays an essential role in structure-based drug design.
The challenge for a protein–ligand docking method is how to execute an efficient …

Identification of 1, 2, 3-triazole-phthalimide derivatives as potential drugs against COVID-19: a virtual screening, docking and molecular dynamic study

VN Holanda, EMA Lima, WV Silva… - Journal of …, 2022 - Taylor & Francis
In this work we aimed to perform an in silico predictive screening, docking and molecular
dynamic study to identify 1, 2, 3-triazole-phthalimide derivatives as drug candidates against …

Autodock koto: A gradient boosting differential evolution for molecular docking

J Ji, J Zhou, Z Yang, Q Lin… - IEEE Transactions on …, 2022 - ieeexplore.ieee.org
Molecular docking plays a vital role in modern drug discovery, by supporting predictions of
the binding modes and affinities of ligands at the binding site of target proteins. Several …

A new multi-objective approach for molecular docking based on RMSD and binding energy

E López-Camacho, MJ García-Godoy… - … , AlCoB 2016, Trujillo …, 2016 - Springer
Ligand-protein docking is an optimization problem based on predicting the position of a
ligand with the lowest binding energy in the active site of the receptor. Molecular docking …