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Alternative cleavage and polyadenylation in health and disease
Most human genes have multiple sites at which RNA 3ʹ end cleavage and polyadenylation
can occur, enabling the expression of distinct transcript isoforms under different conditions …
can occur, enabling the expression of distinct transcript isoforms under different conditions …
Alternative cleavage and polyadenylation: extent, regulation and function
The 3′ end of most protein-coding genes and long non-coding RNAs is cleaved and
polyadenylated. Recent discoveries have revealed that a large proportion of these genes …
polyadenylated. Recent discoveries have revealed that a large proportion of these genes …
Dynamic landscape and evolution of m6A methylation in human
Abstract m6A is a prevalent internal modification in mRNAs and has been linked to the
diverse effects on mRNA fate. To explore the landscape and evolution of human m6A, we …
diverse effects on mRNA fate. To explore the landscape and evolution of human m6A, we …
U1 snRNP regulates cancer cell migration and invasion in vitro
Stimulated cells and cancer cells have widespread shortening of mRNA 3'-untranslated
regions (3'UTRs) and switches to shorter mRNA isoforms due to usage of more proximal …
regions (3'UTRs) and switches to shorter mRNA isoforms due to usage of more proximal …
A majority of m6A residues are in the last exons, allowing the potential for 3′ UTR regulation
We adapted UV CLIP (cross-linking immunoprecipitation) to accurately locate tens of
thousands of m6A residues in mammalian mRNA with single-nucleotide resolution. More …
thousands of m6A residues in mammalian mRNA with single-nucleotide resolution. More …
Mammalian NET-seq reveals genome-wide nascent transcription coupled to RNA processing
Transcription is a highly dynamic process. Consequently, we have developed native
elongating transcript sequencing technology for mammalian chromatin (mNET-seq), which …
elongating transcript sequencing technology for mammalian chromatin (mNET-seq), which …
Dynamic analyses of alternative polyadenylation from RNA-seq reveal a 3′-UTR landscape across seven tumour types
Alternative polyadenylation (APA) is a pervasive mechanism in the regulation of most
human genes, and its implication in diseases including cancer is only beginning to be …
human genes, and its implication in diseases including cancer is only beginning to be …
Alternative mRNA transcription, processing, and translation: insights from RNA sequencing
The human transcriptome comprises> 80000 protein-coding transcripts and the estimated
number of proteins synthesized from these transcripts is in the range of 250000 to 1 million …
number of proteins synthesized from these transcripts is in the range of 250000 to 1 million …
CFIm25 links alternative polyadenylation to glioblastoma tumour suppression
The global shortening of messenger RNAs through alternative polyadenylation (APA) that
occurs during enhanced cellular proliferation represents an important, yet poorly understood …
occurs during enhanced cellular proliferation represents an important, yet poorly understood …
[HTML][HTML] iCLIP: protein–RNA interactions at nucleotide resolution
RNA-binding proteins (RBPs) are key players in the post-transcriptional regulation of gene
expression. Precise knowledge about their binding sites is therefore critical to unravel their …
expression. Precise knowledge about their binding sites is therefore critical to unravel their …