Emerging pathways for engineering the rhizosphere microbiome for optimal plant health

S Yang, H Liu, P **e, T Wen, Q Shen… - Journal of Agricultural …, 2023 - ACS Publications
The increasing impacts of global climate change on crop performance pose a significant
threat to global food security. The rhizosphere microbiomes intimately interact with the plant …

The community-function landscape of microbial consortia

A Sanchez, D Bajic, J Diaz-Colunga, A Skwara… - Cell Systems, 2023 - cell.com
Quantitatively linking the composition and function of microbial communities is a major
aspiration of microbial ecology. Microbial community functions emerge from a complex web …

Microbiome breeding: conceptual and practical issues

UG Mueller, TA Linksvayer - Trends in microbiology, 2022 - cell.com
Microbiome breeding is a new artificial selection technique that seeks to change the genetic
composition of microbiomes in order to benefit plant or animal hosts. Recent experimental …

Engineering complex communities by directed evolution

CY Chang, JCC Vila, M Bender, R Li… - Nature ecology & …, 2021 - nature.com
Directed evolution has been used for decades to engineer biological systems at or below
the organismal level. Above the organismal level, a small number of studies have attempted …

Directed evolution of microbial communities

Á Sánchez, JCC Vila, CY Chang… - Annual review of …, 2021 - annualreviews.org
Directed evolution is a form of artificial selection that has been used for decades to find
biomolecules and organisms with new or enhanced functional traits. Directed evolution can …

Steering ecological-evolutionary dynamics to improve artificial selection of microbial communities

L **e, W Shou - Nature Communications, 2021 - nature.com
Microbial communities often perform important functions that depend on inter-species
interactions. To improve community function via artificial selection, one can repeatedly grow …

[HTML][HTML] Synthetic biology tools for environmental protection

J Aminian-Dehkordi, S Rahimi, M Golzar-Ahmadi… - Biotechnology …, 2023 - Elsevier
Synthetic biology transforms the way we perceive biological systems. Emerging
technologies in this field affect many disciplines of science and engineering. Traditionally …

Enhancing phosphate-solubilising microbial communities through artificial selection

L Faller, MFA Leite, EE Kuramae - Nature Communications, 2024 - nature.com
Microbial communities, acting as key drivers of ecosystem processes, harbour immense
potential for sustainable agriculture practices. Phosphate-solubilising microorganisms, for …

Guided by the principles of microbiome engineering: Accomplishments and perspectives for environmental use

H Hu, M Wang, Y Huang, Z Xu, P Xu, Y Nie, H Tang - Mlife, 2022 - Wiley Online Library
Although the accomplishments of microbiome engineering highlight its significance for the
targeted manipulation of microbial communities, knowledge and technical gaps still limit the …

[HTML][HTML] Artificial selection of microbial communities: what have we learnt and how can we improve?

JL Thomas, J Rowland-Chandler, W Shou - Current Opinion in …, 2024 - Elsevier
Microbial communities are capable of performing diverse functions with important
bioindustrial and medical applications. One approach to improving a community function is …