The dawn of spatial omics

D Bressan, G Battistoni, GJ Hannon - Science, 2023‏ - science.org
Spatial omics has been widely heralded as the new frontier in life sciences. This term
encompasses a wide range of techniques that promise to transform many areas of biology …

To metabolomics and beyond: a technological portfolio to investigate cancer metabolism

F Danzi, R Pacchiana, A Mafficini, MT Scupoli… - … and Targeted Therapy, 2023‏ - nature.com
Tumour cells have exquisite flexibility in reprogramming their metabolism in order to support
tumour initiation, progression, metastasis and resistance to therapies. These reprogrammed …

Multi-omics single-cell data integration and regulatory inference with graph-linked embedding

ZJ Cao, G Gao - Nature Biotechnology, 2022‏ - nature.com
Despite the emergence of experimental methods for simultaneous measurement of multiple
omics modalities in single cells, most single-cell datasets include only one modality. A major …

Inductively coupled plasma mass spectrometry

T Van Acker, S Theiner, E Bolea-Fernandez… - Nature Reviews …, 2023‏ - nature.com
Inductively coupled plasma mass spectrometry (ICP-MS) combines plasma chemistry, which
produces singly charged elemental ions, with mass spectrometric detection. Unlike other …

T cell subsets and functions in atherosclerosis

R Saigusa, H Winkels, K Ley - Nature Reviews Cardiology, 2020‏ - nature.com
Atherosclerosis is a chronic inflammatory disease of the arterial wall and the primary
underlying cause of cardiovascular disease. Data from in vivo imaging, cell-lineage tracing …

[HTML][HTML] Determinants of resident tissue macrophage identity and function

C Blériot, S Chakarov, F Ginhoux - Immunity, 2020‏ - cell.com
Resident tissue macrophages (RTMs) have a broad spectrum of immune-and non-immune-
related tissue-supporting activities. The roots of this heterogeneity and versatility are only …

Streamlined single-cell proteomics by an integrated microfluidic chip and data-independent acquisition mass spectrometry

ST Gebreyesus, AA Siyal, RB Kitata, ESW Chen… - Nature …, 2022‏ - nature.com
Single-cell proteomics can reveal cellular phenotypic heterogeneity and cell-specific
functional networks underlying biological processes. Here, we present a streamlined …

Microfluidic impedance cytometry enabled one‐step sample preparation for efficient single‐cell mass spectrometry

J Zhu, S Pan, H Chai, P Zhao, Y Feng, Z Cheng… - Small, 2024‏ - Wiley Online Library
Single‐cell mass spectrometry (MS) is significant in biochemical analysis and holds great
potential in biomedical applications. Efficient sample preparation like sorting (ie, separating …

OMIP‐069: forty‐color full spectrum flow cytometry panel for deep immunophenoty** of major cell subsets in human peripheral blood

LM Park, J Lannigan, MC Jaimes - Cytometry Part A, 2020‏ - Wiley Online Library
PURPOSE AND APPROPRIATE SAMPLE TYPES This 40‐color flow cytometry‐based panel
was developed for in‐depth immunophenoty** of the major cell subsets present in human …

T cell dysfunction in cancer

DS Thommen, TN Schumacher - Cancer cell, 2018‏ - cell.com
Therapeutic reinvigoration of tumor-specific T cells has greatly improved clinical outcome in
cancer. Nevertheless, many patients still do not achieve durable benefit. Recent evidence …