Cysteine cathepsins and their extracellular roles: sha** the microenvironment

E Vidak, U Javoršek, M Vizovišek, B Turk - Cells, 2019 - mdpi.com
For a long time, cysteine cathepsins were considered primarily as proteases crucial for
nonspecific bulk proteolysis in the endolysosomal system. However, this view has …

Click chemistry in proteomic investigations

CG Parker, MR Pratt - Cell, 2020 - cell.com
Despite advances in genetic and proteomic techniques, a complete portrait of the proteome
and its complement of dynamic interactions and modifications remains a lofty, and as of yet …

Recent advances in activity-based probes (ABPs) and affinity-based probes (A f BPs) for profiling of enzymes

H Fang, B Peng, SY Ong, Q Wu, L Li, SQ Yao - Chemical science, 2021 - pubs.rsc.org
Activity-based protein profiling (ABPP) is a technique that uses highly selective active-site
targeted chemical probes to label and monitor the state of proteins. ABPP integrates the …

Redox-based reagents for chemoselective methionine bioconjugation

S Lin, X Yang, S Jia, AM Weeks, M Hornsby, PS Lee… - Science, 2017 - science.org
Cysteine can be specifically functionalized by a myriad of acid-base conjugation strategies
for applications ranging from probing protein function to antibody-drug conjugates and …

Targeted covalent inhibitors for drug design

TA Baillie - Angewandte Chemie International Edition, 2016 - Wiley Online Library
In contrast to the traditional mechanism of drug action that relies on the reversible,
noncovalent interaction of a ligand with its biological target, a targeted covalent inhibitor …

Photoaffinity labelling with small molecules

RA Homan, JD Lapek, CM Woo, S Niessen… - Nature Reviews …, 2024 - nature.com
Small molecules can serve as leads for new therapeutics as well as powerful tools to
investigate biological processes. Understanding the interactions of these molecules …

DNAzymes as activity-based sensors for metal ions: recent applications, demonstrated advantages, current challenges, and future directions

RJ Lake, Z Yang, JJ Zhang, Y Lu - Accounts of chemical research, 2019 - ACS Publications
Conspectus Metal ions can be beneficial or toxic depending on their identity, oxidation state,
and concentration. Therefore, the ability to detect and quantify different types of metal ions …

A critical and comparative review of fluorescent tools for live-cell imaging

EA Specht, E Braselmann… - Annual review of …, 2017 - annualreviews.org
Fluorescent tools have revolutionized our ability to probe biological dynamics, particularly at
the cellular level. Fluorescent sensors have been developed on several platforms, utilizing …

Reimagining druggability using chemoproteomic platforms

JN Spradlin, E Zhang, DK Nomura - Accounts of Chemical …, 2021 - ACS Publications
Conspectus One of the biggest bottlenecks in modern drug discovery efforts is in tackling the
undruggable proteome. Currently, over 85% of the proteome is still considered undruggable …

Biotechnological applications of proteases in food technology

OL Tavano, A Berenguer‐Murcia… - … reviews in food …, 2018 - Wiley Online Library
This review presents some of the hottest topics in biotechnological applications: proteases in
biocatalysis. Obviously, one of the most relevant areas of application is in the hydrolysis of …