[9] TM4 microarray software suite

AI Saeed, NK Bhagabati, JC Braisted, W Liang… - Methods in …, 2006 - Elsevier
Powerful specialized software is essential for managing, quantifying, and ultimately deriving
scientific insight from results of a microarray experiment. We have developed a suite of …

The use and analysis of microarray data

A Butte - Nature reviews drug discovery, 2002 - nature.com
Functional genomics is the study of gene function through the parallel expression
measurements of genomes, most commonly using the technologies of microarrays and …

Springer series in statistics

P Bickel, P Diggle, S Fienberg, U Gather, I Olkin… - Principles and Theory …, 2009 - Springer
The idea for this book came from the time the authors spent at the Statistics and Applied
Mathematical Sciences Institute (SAMSI) in Research Triangle Park in North Carolina …

Comparison of discrimination methods for the classification of tumors using gene expression data

S Dudoit, J Fridlyand, TP Speed - Journal of the American …, 2002 - Taylor & Francis
A reliable and precise classification of tumors is essential for successful diagnosis and
treatment of cancer. cDNA microarrays and high-density oligonucleotide chips are novel …

[SÁCH][B] Henri Lefebvre: A critical introduction

A Merrifield - 2013 - books.google.com
Philosopher, sociologist and urban theorist, Henri Lefebvre is one of the great social
theorists of the twentieth century. This accessible and innovative introduction to the work of …

Multiple hypothesis testing in microarray experiments

S Dudoit, JP Shaffer, JC Boldrick - Statistical Science, 2003 - projecteuclid.org
DNA microarrays are part of a new and promising class of biotechnologies that allow the
monitoring of expression levels in cells for thousands of genes simultaneously. An important …

A comparison of background correction methods for two-colour microarrays

ME Ritchie, J Silver, A Oshlack, M Holmes… - …, 2007 - academic.oup.com
Motivation: Microarray data must be background corrected to remove the effects of non-
specific binding or spatial heterogeneity across the array, but this practice typically causes …

A prediction-based resampling method for estimating the number of clusters in a dataset

S Dudoit, J Fridlyand - Genome biology, 2002 - Springer
Background Microarray technology is increasingly being applied in biological and medical
research to address a wide range of problems, such as the classification of tumors. An …

Leaf vitamin C contents modulate plant defense transcripts and regulate genes that control development through hormone signaling

GM Pastori, G Kiddle, J Antoniw, S Bernard… - The Plant …, 2003 - academic.oup.com
Vitamin C deficiency in the Arabidopsis mutant vtc1 causes slow growth and late flowering.
This is not attributable to changes in photosynthesis or increased oxidative stress. We have …

[SÁCH][B] Multiple testing procedures with applications to genomics

S Dudoit, MJ Van Der Laan, MJ van der Laan - 2008 - Springer
This book establishes the theoretical foundations of a general methodology for multiple
hypothesis testing and discusses its software implementation in R and SAS. The methods …