Polysaccharide degradation by the Bacteroidetes: mechanisms and nomenclature

LS McKee, SL La Rosa, B Westereng… - Environmental …, 2021 - Wiley Online Library
The Bacteroidetes phylum is renowned for its ability to degrade a wide range of complex
carbohydrates, a trait that has enabled its dominance in many diverse environments. The …

The biogeochemistry of marine polysaccharides: sources, inventories, and bacterial drivers of the carbohydrate cycle

C Arnosti, M Wietz, T Brinkhoff… - Annual Review of …, 2021 - annualreviews.org
Polysaccharides are major components of macroalgal and phytoplankton biomass and
constitute a large fraction of the organic matter produced and degraded in the ocean. Until …

Verrucomicrobia use hundreds of enzymes to digest the algal polysaccharide fucoidan

A Sichert, CH Corzett, MS Schechter, F Unfried… - Nature …, 2020 - nature.com
Brown algae are important players in the global carbon cycle by fixing carbon dioxide into 1
Gt of biomass annually, yet the fate of fucoidan—their major cell wall polysaccharide …

Diatom fucan polysaccharide precipitates carbon during algal blooms

S Vidal-Melgosa, A Sichert, TB Francis… - Nature …, 2021 - nature.com
The formation of sinking particles in the ocean, which promote carbon sequestration into
deeper water and sediments, involves algal polysaccharides acting as an adhesive, binding …

Diatom modulation of select bacteria through use of two unique secondary metabolites

AA Shibl, A Isaac, MA Ochsenkuhn… - Proceedings of the …, 2020 - National Acad Sciences
Unicellular eukaryotic phytoplankton, such as diatoms, rely on microbial communities for
survival despite lacking specialized compartments to house microbiomes (eg, animal gut) …

Resource partitioning of phytoplankton metabolites that support bacterial heterotrophy

FX Ferrer-González, B Widner, NR Holderman… - The ISME …, 2021 - academic.oup.com
The communities of bacteria that assemble around marine microphytoplankton are
predictably dominated by Rhodobacterales, Flavobacteriales, and families within the …

Particle-attached bacteria act as gatekeepers in the decomposition of complex phytoplankton polysaccharides

FQ Wang, D Bartosik, C Sidhu, R Siebers, DC Lu… - Microbiome, 2024 - Springer
Background Marine microalgae (phytoplankton) mediate almost half of the worldwide
photosynthetic carbon dioxide fixation and therefore play a pivotal role in global carbon …

Bacterial alginate metabolism: an important pathway for bioconversion of brown algae

L Zhang, X Li, X Zhang, Y Li, L Wang - Biotechnology for Biofuels, 2021 - Springer
Brown macroalgae have attracted great attention as an alternative feedstock for biorefining.
Although direct conversion of ethanol from alginates (major components of brown …

Particulate organic carbon deconstructed: molecular and chemical composition of particulate organic carbon in the ocean

JJ Kharbush, HG Close, BAS Van Mooy… - Frontiers in Marine …, 2020 - frontiersin.org
The dynamics of the particulate organic carbon (POC) pool in the ocean are central to the
marine carbon cycle. POC is the link between surface primary production, the deep ocean …

dbCAN-PUL: a database of experimentally characterized CAZyme gene clusters and their substrates

C Ausland, J Zheng, H Yi, B Yang, T Li… - Nucleic Acids …, 2021 - academic.oup.com
PULs (p olysaccharide u tilization l oci) are discrete gene clusters of CAZymes (C
arbohydrate A ctive En Zymes) and other genes that work together to digest and utilize …