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Dimension reduction techniques for the integrative analysis of multi-omics data
State-of-the-art next-generation sequencing, transcriptomics, proteomics and other high-
throughput 'omics' technologies enable the efficient generation of large experimental data …
throughput 'omics' technologies enable the efficient generation of large experimental data …
Enter the matrix: factorization uncovers knowledge from omics
Omics data contain signals from the molecular, physical, and kinetic inter-and intracellular
interactions that control biological systems. Matrix factorization (MF) techniques can reveal …
interactions that control biological systems. Matrix factorization (MF) techniques can reveal …
A placental model of SARS-CoV-2 infection reveals ACE2-dependent susceptibility and differentiation impairment in syncytiotrophoblasts
SARS-CoV-2 infection causes COVID-19. Several clinical reports have linked COVID-19
during pregnancy to negative birth outcomes and placentitis. However, the …
during pregnancy to negative birth outcomes and placentitis. However, the …
Enhanced cortical neural stem cell identity through short SMAD and WNT inhibition in human cerebral organoids facilitates emergence of outer radial glial cells
Cerebral organoids exhibit broad regional heterogeneity accompanied by limited cortical
cellular diversity despite the tremendous upsurge in derivation methods, suggesting …
cellular diversity despite the tremendous upsurge in derivation methods, suggesting …
[9] TM4 microarray software suite
AI Saeed, NK Bhagabati, JC Braisted, W Liang… - Methods in …, 2006 - Elsevier
Powerful specialized software is essential for managing, quantifying, and ultimately deriving
scientific insight from results of a microarray experiment. We have developed a suite of …
scientific insight from results of a microarray experiment. We have developed a suite of …
[LLIBRE][B] Henri Lefebvre: A critical introduction
A Merrifield - 2013 - books.google.com
Philosopher, sociologist and urban theorist, Henri Lefebvre is one of the great social
theorists of the twentieth century. This accessible and innovative introduction to the work of …
theorists of the twentieth century. This accessible and innovative introduction to the work of …
A multivariate approach to the integration of multi-omics datasets
Background To leverage the potential of multi-omics studies, exploratory data analysis
methods that provide systematic integration and comparison of multiple layers of omics …
methods that provide systematic integration and comparison of multiple layers of omics …
Global patterns in ecological indicators of marine food webs: a modelling approach
Background Ecological attributes estimated from food web models have the potential to be
indicators of good environmental status given their capabilities to describe redundancy, food …
indicators of good environmental status given their capabilities to describe redundancy, food …
Changes in the endometrial transcriptome during the bovine estrous cycle: effect of low circulating progesterone and consequences for conceptus elongation
N Forde, ME Beltman, GB Duffy, P Duffy… - Biology of …, 2011 - academic.oup.com
In cattle, elevated concentrations of circulating progesterone (P4) in the immediate
postconception period are associated with advanced conceptus development, while low P4 …
postconception period are associated with advanced conceptus development, while low P4 …
MADE4: an R package for multivariate analysis of gene expression data
MADE4, m icroarray ade4, is a software package that facilitates multivariate analysis of
microarray gene-expression data. MADE4 accepts a wide variety of gene-expression data …
microarray gene-expression data. MADE4 accepts a wide variety of gene-expression data …