Plant virus metagenomics: advances in virus discovery
In recent years plant viruses have been detected from many environments, including
domestic and wild plants and interfaces between these systems—aquatic sources, feces of …
domestic and wild plants and interfaces between these systems—aquatic sources, feces of …
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
RI Amann, W Ludwig, KH Schleifer - Microbiological reviews, 1995 - Am Soc Microbiol
The frequent discrepancy between direct microscopic counts and numbers of culturable
bacteria from environmental samples is just one of several indications that we currently …
bacteria from environmental samples is just one of several indications that we currently …
Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring
The last decade brought a spectacular development of so‐called environmental (e) DNA
studies. In general,“environmental DNA” is defined as DNA isolated from environmental …
studies. In general,“environmental DNA” is defined as DNA isolated from environmental …
QMEC: a tool for high-throughput quantitative assessment of microbial functional potential in C, N, P, and S biogeochemical cycling
Microorganisms are major drivers of elemental cycling in the biosphere. Determining the
abundance of microbial functional traits involved in the transformation of nutrients, including …
abundance of microbial functional traits involved in the transformation of nutrients, including …
The NIH human microbiome project
J Peterson, S Garges, M Giovanni, P McInnes… - Genome …, 2009 - genome.cshlp.org
The Human Microbiome Project (HMP), funded as an initiative of the NIH Roadmap for
Biomedical Research (http://nihroadmap. nih. gov), is a multi-component community …
Biomedical Research (http://nihroadmap. nih. gov), is a multi-component community …
Metagenomic analyses: past and future trends
C Simon, R Daniel - Applied and environmental microbiology, 2011 - Am Soc Microbiol
Metagenomics has revolutionized microbiology by paving the way for a cultivation-
independent assessment and exploitation of microbial communities present in complex …
independent assessment and exploitation of microbial communities present in complex …
Metagenomics and future perspectives in virus discovery
Monitoring the emergence and re-emergence of viral diseases with the goal of containing
the spread of viral agents requires both adequate preparedness and quick response …
the spread of viral agents requires both adequate preparedness and quick response …
Archaea in coastal marine environments.
EF DeLong - Proceedings of the National Academy of …, 1992 - National Acad Sciences
Archaea (archaebacteria) are a phenotypically diverse group of microorganisms that share a
common evolutionary history. There are four general phenotypic groups of archaea: the …
common evolutionary history. There are four general phenotypic groups of archaea: the …
Metagenomics: application of genomics to uncultured microorganisms
J Handelsman - Microbiology and molecular biology reviews, 2004 - Am Soc Microbiol
Metagenomics (also referred to as environmental and community genomics) is the genomic
analysis of microorganisms by direct extraction and cloning of DNA from an assemblage of …
analysis of microorganisms by direct extraction and cloning of DNA from an assemblage of …
Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity
Our perspective on microbial diversity has improved enormously over the past few decades.
In large part this has been due to molecular phylogenetic studies that objectively relate …
In large part this has been due to molecular phylogenetic studies that objectively relate …