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A clinical trials corpus annotated with UMLS entities to enhance the access to evidence-based medicine
Background The large volume of medical literature makes it difficult for healthcare
professionals to keep abreast of the latest studies that support Evidence-Based Medicine …
professionals to keep abreast of the latest studies that support Evidence-Based Medicine …
[HTML][HTML] A clinician friendly data warehouse oriented toward narrative reports: Dr. Warehouse
Introduction Clinical data warehouses are often oriented toward integration and exploration
of coded data. However narrative reports are of crucial importance for translational research …
of coded data. However narrative reports are of crucial importance for translational research …
Biomedical corpora and natural language processing on clinical text in languages other than English: a systematic review
Abstract Natural Language Processing (NLP) applications on real-life textual content require
a suitable fit for purpose corpora, which can accommodate the ambiguity of the domain …
a suitable fit for purpose corpora, which can accommodate the ambiguity of the domain …
[PDF][PDF] Overview of MedProcNER Task on Medical Procedure Detection and Entity Linking at BioASQ 2023.
Recent advances in NLP techniques, the use of large language models and Transformers
are showing promising results for processing clinical content. The development of tools for …
are showing promising results for processing clinical content. The development of tools for …
Natural language processing: from bedside to everywhere
Objectives: Owing to the rapid progress of natural language processing (NLP), the role of
NLP in the medical field has radically gained considerable attention from both NLP and …
NLP in the medical field has radically gained considerable attention from both NLP and …
A distributable German clinical corpus containing cardiovascular clinical routine doctor's letters
We present CARDIO: DE, the first freely available and distributable large German clinical
corpus from the cardiovascular domain. CARDIO: DE encompasses 500 clinical routine …
corpus from the cardiovascular domain. CARDIO: DE encompasses 500 clinical routine …
Automatic extraction of nested entities in clinical referrals in Spanish
Here we describe a new clinical corpus rich in nested entities and a series of neural models
to identify them. The corpus comprises de-identified referrals from the waiting list in Chilean …
to identify them. The corpus comprises de-identified referrals from the waiting list in Chilean …
Terminologies augmented recurrent neural network model for clinical named entity recognition
Objective We aimed to enhance the performance of a supervised model for clinical named-
entity recognition (NER) using medical terminologies. In order to evaluate our system in …
entity recognition (NER) using medical terminologies. In order to evaluate our system in …
Temporal relation extraction in clinical texts: a systematic review
Unstructured data in electronic health records, represented by clinical texts, are a vast
source of healthcare information because they describe a patient's journey, including clinical …
source of healthcare information because they describe a patient's journey, including clinical …
Can synthetic text help clinical named entity recognition? a study of electronic health records in French
In sensitive domains, the sharing of corpora is restricted due to confidentiality, copyrights, or
trade secrets. Automatic text generation can help alleviate these issues by producing …
trade secrets. Automatic text generation can help alleviate these issues by producing …