Introns: the functional benefits of introns in genomes

BS Jo, SS Choi - Genomics & informatics, 2015 - pmc.ncbi.nlm.nih.gov
The intron has been a big biological mystery since it was first discovered in several aspects.
First, all of the completely sequenced eukaryotes harbor introns in the genomic structure …

Origin and evolution of spliceosomal introns

IB Rogozin, L Carmel, M Csuros, EV Koonin - Biology direct, 2012 - Springer
Evolution of exon-intron structure of eukaryotic genes has been a matter of long-standing,
intensive debate. The introns-early concept, later rebranded 'introns first'held that protein …

ERK1 and ERK2 map kinases: specific roles or functional redundancy?

R Buscà, J Pouysségur, P Lenormand - Frontiers in cell and …, 2016 - frontiersin.org
The MAP kinase signaling cascade Ras/Raf/MEK/ERK has been involved in a large variety
of cellular and physiological processes that are crucial for life. Many pathological situations …

Recombinant spider silk: promises and bottlenecks

M Ramezaniaghdam, ND Nahdi… - Frontiers in Bioengineering …, 2022 - frontiersin.org
Spider silk threads have exceptional mechanical properties such as toughness, elasticity
and low density, which reach maximum values compared to other fibre materials. They are …

Blueprint for a high-performance biomaterial: full-length spider dragline silk genes

NA Ayoub, JE Garb, RM Tinghitella, MA Collin… - PloS one, 2007 - journals.plos.org
Spider dragline (major ampullate) silk outperforms virtually all other natural and manmade
materials in terms of tensile strength and toughness. For this reason, the mass-production of …

Wnt/β-catenin signalling is required for pole-specific chromatin remodeling during planarian regeneration

E Pascual-Carreras, M Marín-Barba… - Nature …, 2023 - nature.com
For successful regeneration, the identity of the missing tissue must be specified according to
the pre-existing tissue. Planarians are ideal for the study of the mechanisms underlying this …

Body-Methylated Genes in Arabidopsis thaliana Are Functionally Important and Evolve Slowly

S Takuno, BS Gaut - Molecular biology and evolution, 2012 - academic.oup.com
DNA methylation of coding regions, known as gene body methylation, is conserved across
eukaryotic lineages. The function of body methylation is not known, but it may either prevent …

An evolutionary view of human recombination

G Coop, M Przeworski - Nature Reviews Genetics, 2007 - nature.com
Recombination has essential functions in mammalian meiosis, which impose several
constraints on the recombination process. However, recent studies have shown that, in spite …

The architecture of pre-mRNAs affects mechanisms of splice-site pairing

KL Fox-Walsh, Y Dou, BJ Lam, S Hung… - Proceedings of the …, 2005 - pnas.org
The exon/intron architecture of genes determines whether components of the spliceosome
recognize splice sites across the intron or across the exon. Using in vitro splicing assays, we …

Evolution of protein-coding genes in Drosophila

AM Larracuente, TB Sackton, AJ Greenberg, A Wong… - Trends in Genetics, 2008 - cell.com
Several contributing factors have been implicated in evolutionary rate heterogeneity among
proteins, but their evolutionary mechanisms remain poorly characterized. The recently …