High-end ion mobility mass spectrometry: A current review of analytical capacity in omics applications and structural investigations

DG Delafield, G Lu, CJ Kaminsky, L Li - TrAC Trends in Analytical …, 2022 - Elsevier
Mass spectrometry-based biomolecular analyses have become permanent fixtures of
academic, industrial, and clinical research settings. The rise in utilization of mass …

Identification of regulatory factors promoting embryogenic callus formation in barley through transcriptome analysis

J Suo, C Zhou, Z Zeng, X Li, H Bian, J Wang, M Zhu… - BMC Plant …, 2021 - Springer
Background Barley is known to be recalcitrant to tissue culture, which hinders genetic
transformation and its biotechnological application. To date, the ideal explant for …

Dehydration priming remodels protein abundance and phosphorylation level regulating tolerance to subsequent dehydration or salt stress in cree** bentgrass

H Yang, Y Yuan, Z Li - Journal of Proteomics, 2025 - Elsevier
Dehydration priming (DP) induces stress memory which plays a positive role in plant
adaptability, but it is not well understood how DP differentially regulates subsequent …

Development and application of Single Primer Enrichment Technology (SPET) SNP assay for population genomics analysis and candidate gene discovery in lettuce

P Tripodi, M Beretta, D Peltier, I Kalfas… - Frontiers in Plant …, 2023 - frontiersin.org
Single primer enrichment technology (SPET) is a novel high-throughput genoty** method
based on short-read sequencing of specific genomic regions harboring polymorphisms …

Comparative proteomic analysis and antioxidant enzyme activity provide new insights into the embryogenic competence of Guadua chacoensis (Bambusoideae …

LG Polesi, HP de Freitas Fraga, FA Almeida… - Journal of …, 2023 - Elsevier
Somatic embryogenesis (SE) involves modifications of cellular, biochemical, genetic, and
epigenetic patterns. Our work investigated proteins as markers of embryogenic response …

Gel‐based and gel‐free phosphoproteomics to measure and characterize mitochondrial phosphoproteins

V Thongboonkerd, S Chaiyarit - Current Protocols, 2022 - Wiley Online Library
The mitochondrion is a key intracellular organelle regulating metabolic processes, oxidative
stress, energy production, calcium homeostasis, and cell survival. Protein phosphorylation …

Time-Dependent Proteomic Signatures Associated with Embryogenic Callus Induction in Carica papaya L.

LR Xavier, CCG Corrêa, RP da Paschoa, KS Vieira… - Plants, 2023 - mdpi.com
Sex segregation increases the cost of Carica papaya production through seed-based
propagation. Therefore, in vitro techniques are an attractive option for clonal propagation …

A Rapid and Universal Workflow for Label‐Free‐Quantitation‐Based Proteomic and Phosphoproteomic Studies in Cereals

M He, J Wang, S Herold, L **, WX Schulze - Current Protocols, 2022 - Wiley Online Library
Proteomics and phosphoproteomics are robust tools to analyze dynamics of post‐
transcriptional processes during growth and development. A variety of experimental …

Integrative proteomics and phosphoproteomics reveals phosphorylation networks involved in the maintenance and expression of embryogenic competence in …

LR Xavier, FA Almeida, VB Pinto, LZ Passamani… - Journal of Plant …, 2022 - Elsevier
Plant embryogenic cell culture allows mass propagation and genetic manipulation, but the
mechanisms that determine the fate of these totipotent cells in somatic embryos have not yet …

Somatic Embryogenesis in Sugarcane (Saccharum spp.)

FA Almeida, C Santa-Catarina, V Silveira - … Embryogenesis: Methods and …, 2022 - Springer
Somatic embryogenesis is the process by which embryos are formed from a single or small
group of somatic cells in response to specific stimuli. Somatic embryogenesis has been …