A tutorial for information theory in neuroscience
Understanding how neural systems integrate, encode, and compute information is central to
understanding brain function. Frequently, data from neuroscience experiments are …
understanding brain function. Frequently, data from neuroscience experiments are …
Transfer entropy—a model-free measure of effective connectivity for the neurosciences
Understanding causal relationships, or effective connectivity, between parts of the brain is of
utmost importance because a large part of the brain's activity is thought to be internally …
utmost importance because a large part of the brain's activity is thought to be internally …
[BOOK][B] Transfer entropy
Transfer Entropy Page 1 Chapter 4 Transfer Entropy In this chapter we get to the essential
mathematics of the book—a detailed discussion of transfer entropy. To begin with we look at …
mathematics of the book—a detailed discussion of transfer entropy. To begin with we look at …
Bits from brains for biologically inspired computing
Inspiration for artificial biologically inspired computing is often drawn from neural systems.
This article shows how to analyze neural systems using information theory with the aim of …
This article shows how to analyze neural systems using information theory with the aim of …
JIDT: An information-theoretic toolkit for studying the dynamics of complex systems
JT Lizier - Frontiers in Robotics and AI, 2014 - frontiersin.org
Complex systems are increasingly being viewed as distributed information processing
systems, particularly in the domains of computational neuroscience, bioinformatics, and …
systems, particularly in the domains of computational neuroscience, bioinformatics, and …
Phase transfer entropy: a novel phase-based measure for directed connectivity in networks coupled by oscillatory interactions
We introduce here phase transfer entropy (Phase TE) as a measure of directed connectivity
among neuronal oscillations. Phase TE quantifies the transfer entropy between phase time …
among neuronal oscillations. Phase TE quantifies the transfer entropy between phase time …
HERMES: towards an integrated toolbox to characterize functional and effective brain connectivity
The analysis of the interdependence between time series has become an important field of
research in the last years, mainly as a result of advances in the characterization of …
research in the last years, mainly as a result of advances in the characterization of …
Spectral dynamic causal modeling: A didactic introduction and its relationship with functional connectivity
We present a didactic introduction to spectral dynamic causal modeling (DCM), a Bayesian
state-space modeling approach used to infer effective connectivity from noninvasive …
state-space modeling approach used to infer effective connectivity from noninvasive …
Large-scale directed network inference with multivariate transfer entropy and hierarchical statistical testing
Network inference algorithms are valuable tools for the study of large-scale neuroimaging
datasets. Multivariate transfer entropy is well suited for this task, being a model-free measure …
datasets. Multivariate transfer entropy is well suited for this task, being a model-free measure …
Information dynamics in neuromorphic nanowire networks
Neuromorphic systems comprised of self-assembled nanowires exhibit a range of neural-
like dynamics arising from the interplay of their synapse-like electrical junctions and their …
like dynamics arising from the interplay of their synapse-like electrical junctions and their …