Fishing for fish environmental DNA: Ecological applications, methodological considerations, surveying designs, and ways forward

M Yao, S Zhang, Q Lu, X Chen, SY Zhang… - Molecular …, 2022 - Wiley Online Library
Vast global declines of freshwater and marine fish diversity and population abundance pose
serious threats to both ecosystem sustainability and human livelihoods. Environmental DNA …

Methodology of fish eDNA and its applications in ecology and environment

S Wang, Z Yan, B Hänfling, X Zheng, P Wang… - Science of the Total …, 2021 - Elsevier
Fish environmental DNA (eDNA) studies have made substantial progress during the past
decade, and significant advances in monitoring fishes have been gained by taking …

[HTML][HTML] Methodology for fish biodiversity monitoring with environmental DNA metabarcoding: The primers, databases and bioinformatic pipelines

F **ong, L Shu, H Zeng, X Gan, S He, Z Peng - Water Biology and Security, 2022 - Elsevier
Environmental DNA (eDNA) originates from cellular material shed by organisms into aquatic
or terrestrial environments and can be sampled and monitored using metabarcoding …

eDNA metabarcoding reveals differences in fish diversity and community structure in Danjiang River

J Deng, X Zhang, X Yao, J Rao, F Dai, H Wang… - Scientific Reports, 2024 - nature.com
Fish diversity, an important indicator of aquatic ecosystem health, is declining due to water
pollution, overfishing, climate change, and invasive species. Effective surveying and …

DNA barcoding of Chinese snakes reveals hidden diversity and conservation needs

YH Wu, SB Hou, ZY Yuan, K Jiang… - Molecular Ecology …, 2023 - Wiley Online Library
DNA barcoding has greatly facilitated studies of taxonomy, biodiversity, biological
conservation, and ecology. Here, we establish a reliable DNA barcoding library for Chinese …

DNA barcoding identification of Greek freshwater fishes

A Tsoupas, S Papavasileiou, S Minoudi… - PloS one, 2022 - journals.plos.org
Biodiversity is a key factor for the functioning and efficiency of an ecosystem. Greece, though
covering a relatively small surface area, hosts a great deal of species diversity. This is …

Application of eDNA metabarcoding for monitoring the fish diversity of the Jiang** to Fuling section of the upper reaches of the Yangtze River

R Cheng, Y Luo, Q Li, Y Zhang, Z Liu, Q Chen, Y Li… - Hydrobiologia, 2023 - Springer
The fish communities in the Yangtze River (YR) basin is in a degraded state due to the
influence of human factors. Here, we used environmental DNA (eDNA) metabarcoding …

Fishing eDNA in one of the world's largest rivers: a case study of cross-sectional and depth profile sampling in the Yangtze

Y Zhang, X Zhang, F Li, F Altermatt - Environmental Science & …, 2023 - ACS Publications
The world's largest rivers are home to diverse, endemic, and threatened fish species.
However, their sheer sizes make large-scale biomonitoring challenging. While …

DNA barcoding reveals cryptic diversity in the underestimated genus Triplophysa (Cypriniformes: Cobitidae, Nemacheilinae) from the northeastern Qinghai-Tibet …

T Wang, Y Zhang, Z Yang, Z Liu, Y Du - BMC Evolutionary Biology, 2020 - Springer
Background The northeastern part of the Qinghai-Tibet Plateau (QTP) presents a high
number of plateau loach species. As one of the three major groups of fishes distributed on …

Assessing species diversity of Coral Triangle artisanal fisheries: A DNA barcode reference library for the shore fishes retailed at Ambon harbor (Indonesia)

G Limmon, E Delrieu‐Trottin, J Patikawa… - Ecology and …, 2020 - Wiley Online Library
Abstract The Coral Triangle (CT), a region spanning across Indonesia and Philippines, is
home to about 4,350 marine fish species and is among the world's most emblematic regions …