An overview of MetaMap: historical perspective and recent advances

AR Aronson, FM Lang - Journal of the American Medical …, 2010 - academic.oup.com
MetaMap is a widely available program providing access to the concepts in the unified
medical language system (UMLS) Metathesaurus from biomedical text. This study reports on …

An advanced review on text mining in medicine

C Luque, JM Luna, M Luque… - … Reviews: Data Mining …, 2019 - Wiley Online Library
Health care professionals produce abundant textual information in their daily clinical
practice and this information is stored in many diverse sources and, generally, in textual …

Semi-automated screening of biomedical citations for systematic reviews

BC Wallace, TA Trikalinos, J Lau, C Brodley… - BMC …, 2010 - Springer
Background Systematic reviews address a specific clinical question by unbiasedly
assessing and analyzing the pertinent literature. Citation screening is a time-consuming and …

Medical subdomain classification of clinical notes using a machine learning-based natural language processing approach

WH Weng, KB Wagholikar, AT McCray… - BMC medical informatics …, 2017 - Springer
Background The medical subdomain of a clinical note, such as cardiology or neurology, is
useful content-derived metadata for develo** machine learning downstream applications …

Convolutional neural networks for biomedical text classification: application in indexing biomedical articles

A Rios, R Kavuluru - Proceedings of the 6th ACM conference on …, 2015 - dl.acm.org
Building high accuracy text classifiers is an important task in biomedicine given the wealth of
information hidden in unstructured narratives such as research articles and clinical …

MeSH Now: automatic MeSH indexing at PubMed scale via learning to rank

Y Mao, Z Lu - Journal of biomedical semantics, 2017 - Springer
Background MeSH indexing is the task of assigning relevant MeSH terms based on a
manual reading of scholarly publications by human indexers. The task is highly important for …

Towards automatic recognition of scientifically rigorous clinical research evidence

H Kilicoglu, D Demner-Fushman… - Journal of the …, 2009 - academic.oup.com
The growing numbers of topically relevant biomedical publications readily available due to
advances in document retrieval methods pose a challenge to clinicians practicing evidence …

Optimizing feature representation for automated systematic review work prioritization

AM Cohen - AMIA annual symposium proceedings, 2008 - pmc.ncbi.nlm.nih.gov
Automated document classification can be a valuable tool for enhancing the efficiency of
creating and updating systematic reviews (SRs) for evidence-based medicine. One way …

[HTML][HTML] Symptom severity classification with gradient tree boosting

Y Liu, Y Gu, JC Nguyen, H Li, J Zhang, Y Gao… - Journal of biomedical …, 2017 - Elsevier
In this paper, we present our system as submitted in the CEGS N-GRID 2016 task 2 RDoC
classification competition. The task was to determine symptom severity (0–3) in a domain for …

[HTML][HTML] Benchmarking of multi-class algorithms for classifying documents related to stunting

R Kusumaningrum, TA Indihatmoko, SR Juwita… - Applied Sciences, 2020 - mdpi.com
Stunting is a condition in which children experience impaired growth and development,
caused by malnutrition, repeated infections, and inadequate psychosocial stimulation. It …