Transformer architecture and attention mechanisms in genome data analysis: a comprehensive review

SR Choi, M Lee - Biology, 2023 - mdpi.com
Simple Summary The rapidly advancing field of deep learning, specifically transformer-
based architectures and attention mechanisms, has found substantial applicability in …

PCB defect detection based on pseudo-inverse transformation and YOLOv5

X Wang, SS Maidin, M Batumalay - PloS one, 2024 - journals.plos.org
With the development of integrated circuit packaging technology, the layout of printed circuit
boards has become complicated. Moreover, the traditional defect detection methods have …

Transfer Learning of Reconstructing Imaging From Speckles Generated by Different Spatial Coherence Light

Y Zhang, J Zhang, T Li, F Yang, Z Yin - IEEE Access, 2024 - ieeexplore.ieee.org
In recent years, deep learning has been effectively used to reconstruct speckled images
created by the scattering media. However, when a network with previous data training is …

SpliceCannon: A novel framework for the prediction of canonical and non-canonical splice sites based on deep learning

Y Zhang, W Qi, R Lin, J Fan - 2023 IEEE International …, 2023 - ieeexplore.ieee.org
Accurately predicting splice sites in DNA sequences is not only of utmost importance in the
study of gene expression and protein synthesis, but also crucial to precisely understanding …

MAHyNet: Parallel Hybrid Network for RNA-Protein Binding Sites Prediction Based on Multi-Head Attention and Expectation Pooling

W Wang, Z Sun, D Liu, H Zhang, J Li… - IEEE/ACM …, 2024 - ieeexplore.ieee.org
RNA-binding proteins (RBPs) can regulate biological functions by interacting with specific
RNAs, and play an important role in many life activities. Therefore, the rapid identification of …

Enhancing RBP Binding Site Prediction on Long RNA Sequences through Large Language Models

J Guo, Y Yang - 2024 IEEE International Conference on …, 2024 - ieeexplore.ieee.org
RNA binding proteins (RBPs) are crucial in various biological processes and gene
regulation. Accurately predicting RBP binding sites is essential for advancing research in …

Short-Term Load Forecasting via a Multi-Layer Network Based on Feature Weight Optimization

Y Huang, J Gan, Z Wang, Z Zhong… - … Conference on Energy …, 2023 - ieeexplore.ieee.org
Load forecasting is a critical concern for the operation of regulated power systems and
electricity markets. It can guarantee the availability of electricity supply, minimize both …

[CITAZIONE][C] Transformer architecture and attention mechanisms in genome data analysis: a comprehensive review. Biology 2023; 12: 1033

SR Choi, M Lee - 2023 - europepmc.org
The emergence and rapid development of deep learning, specifically transformer-based
architectures and attention mechanisms, have had transformative implications across …