Eleven grand challenges in single-cell data science
The recent boom in microfluidics and combinatorial indexing strategies, combined with low
sequencing costs, has empowered single-cell sequencing technology. Thousands—or even …
sequencing costs, has empowered single-cell sequencing technology. Thousands—or even …
Single-cell sequencing techniques from individual to multiomics analyses
Y Kashima, Y Sakamoto, K Kaneko, M Seki… - … & Molecular Medicine, 2020 - nature.com
Here, we review single-cell sequencing techniques for individual and multiomics profiling in
single cells. We mainly describe single-cell genomic, epigenomic, and transcriptomic …
single cells. We mainly describe single-cell genomic, epigenomic, and transcriptomic …
Somatic genomic changes in single Alzheimer's disease neurons
Dementia in Alzheimer's disease progresses alongside neurodegeneration,,–, but the
specific events that cause neuronal dysfunction and death remain poorly understood. During …
specific events that cause neuronal dysfunction and death remain poorly understood. During …
Mechanisms and therapeutic implications of hypermutation in gliomas
A high tumour mutational burden (hypermutation) is observed in some gliomas,,,–; however,
the mechanisms by which hypermutation develops and whether it predicts the response to …
the mechanisms by which hypermutation develops and whether it predicts the response to …
Aging and neurodegeneration are associated with increased mutations in single human neurons
It has long been hypothesized that aging and neurodegeneration are associated with
somatic mutation in neurons; however, methodological hurdles have prevented testing this …
somatic mutation in neurons; however, methodological hurdles have prevented testing this …
Massively parallel single-cell mitochondrial DNA genoty** and chromatin profiling
Natural mitochondrial DNA (mtDNA) mutations enable the inference of clonal relationships
among cells. mtDNA can be profiled along with measures of cell state, but has not yet been …
among cells. mtDNA can be profiled along with measures of cell state, but has not yet been …
Single-cell genome sequencing of human neurons identifies somatic point mutation and indel enrichment in regulatory elements
Accurate somatic mutation detection from single-cell DNA sequencing is challenging due to
amplification-related artifacts. To reduce this artifact burden, an improved amplification …
amplification-related artifacts. To reduce this artifact burden, an improved amplification …
High-throughput single-сell sequencing in cancer research
Q Jia, H Chu, Z **, H Long, B Zhu - Signal Transduction and Targeted …, 2022 - nature.com
With advances in sequencing and instrument technology, bioinformatics analysis is being
applied to batches of massive cells at single-cell resolution. High-throughput single-cell …
applied to batches of massive cells at single-cell resolution. High-throughput single-cell …
Genetic mosaicism in the human brain: from lineage tracing to neuropsychiatric disorders
Genetic mosaicism is the result of the accumulation of somatic mutations in the human
genome starting from the first postzygotic cell generation and continuing throughout the …
genome starting from the first postzygotic cell generation and continuing throughout the …
Computational immunogenomic approaches to predict response to cancer immunotherapies
Cancer immunogenomics is an emerging field that bridges genomics and immunology. The
establishment of large-scale genomic collaborative efforts along with the development of …
establishment of large-scale genomic collaborative efforts along with the development of …