Toward defining deep brain stimulation targets in MNI space: a subcortical atlas based on multimodal MRI, histology and structural connectivity

S Ewert, P Plettig, N Li, MM Chakravarty, DL Collins… - Neuroimage, 2018 - Elsevier
Three-dimensional atlases of subcortical brain structures are valuable tools to reference
anatomy in neuroscience and neurology. For instance, they can be used to study the …

Multi-atlas segmentation of biomedical images: a survey

JE Iglesias, MR Sabuncu - Medical image analysis, 2015 - Elsevier
Abstract Multi-atlas segmentation (MAS), first introduced and popularized by the pioneering
work of Rohlfing, et al.(2004), Klein, et al.(2005), and Heckemann, et al.(2006), is becoming …

Lead-DBS v2: Towards a comprehensive pipeline for deep brain stimulation imaging

A Horn, N Li, TA Dembek, A Kappel, C Boulay, S Ewert… - Neuroimage, 2019 - Elsevier
Deep brain stimulation (DBS) is a highly efficacious treatment option for movement disorders
and a growing number of other indications are investigated in clinical trials. To ensure …

Regulation of autism-relevant behaviors by cerebellar–prefrontal cortical circuits

E Kelly, F Meng, H Fujita, F Morgado, Y Kazemi… - Nature …, 2020 - nature.com
Cerebellar dysfunction has been demonstrated in autism spectrum disorders (ASDs);
however, the circuits underlying cerebellar contributions to ASD-relevant behaviors remain …

Automated volumetry and regional thickness analysis of hippocampal subfields and medial temporal cortical structures in mild cognitive impairment

PA Yushkevich, JB Pluta, H Wang, L **e… - Human brain …, 2015 - Wiley Online Library
We evaluate a fully automatic technique for labeling hippocampal subfields and cortical
subregions in the medial temporal lobe in in vivo 3 Tesla MRI. The method performs …

Studying neuroanatomy using MRI

JP Lerch, AJW Van Der Kouwe, A Raznahan… - Nature …, 2017 - nature.com
The study of neuroanatomy using imaging enables key insights into how our brains function,
are shaped by genes and environment, and change with development, aging and disease …

Early procedural pain is associated with regionally-specific alterations in thalamic development in preterm neonates

EG Duerden, RE Grunau, T Guo, J Foong… - Journal of …, 2018 - jneurosci.org
Very preterm human neonates are exposed to numerous invasive procedures as part of life-
saving care. Evidence suggests that repetitive neonatal procedural pain precedes long-term …

BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods

KJ Gorgolewski, F Alfaro-Almagro, T Auer… - PLoS computational …, 2017 - journals.plos.org
The rate of progress in human neurosciences is limited by the inability to easily apply a wide
range of analysis methods to the plethora of different datasets acquired in labs around the …

Normative brain size variation and brain shape diversity in humans

PK Reardon, J Seidlitz, S Vandekar, S Liu, R Patel… - Science, 2018 - science.org
Brain size variation over primate evolution and human development is associated with shifts
in the proportions of different brain regions. Individual brain size can vary almost twofold …

Population-wide cerebellar growth models of children and adolescents

C Gaiser, R van der Vliet, AAA de Boer… - Nature …, 2024 - nature.com
In the past, the cerebellum has been best known for its crucial role in motor function.
However, increasingly more findings highlight the importance of cerebellar contributions in …