[HTML][HTML] Methods for cleaning the BOLD fMRI signal

C Caballero-Gaudes, RC Reynolds - Neuroimage, 2017‏ - Elsevier
Blood oxygen-level-dependent functional magnetic resonance imaging (BOLD fMRI) has
rapidly become a popular technique for the investigation of brain function in healthy …

Classification and prediction of brain disorders using functional connectivity: promising but challenging

Y Du, Z Fu, VD Calhoun - Frontiers in neuroscience, 2018‏ - frontiersin.org
Brain functional imaging data, especially functional magnetic resonance imaging (fMRI)
data, have been employed to reflect functional integration of the brain. Alteration in brain …

[HTML][HTML] Hand classification of fMRI ICA noise components

L Griffanti, G Douaud, J Bijsterbosch, S Evangelisti… - Neuroimage, 2017‏ - Elsevier
We present a practical “how-to” guide to help determine whether single-subject fMRI
independent components (ICs) characterise structured noise or not. Manual identification of …

Evaluation of ICA-AROMA and alternative strategies for motion artifact removal in resting state fMRI

RHR Pruim, M Mennes, JK Buitelaar, CF Beckmann - Neuroimage, 2015‏ - Elsevier
We proposed ICA-AROMA as a strategy for the removal of motion-related artifacts from fMRI
data (Pruim et al., 2015). ICA-AROMA automatically identifies and subsequently removes …

Advancing functional connectivity research from association to causation

AT Reid, DB Headley, RD Mill… - Nature …, 2019‏ - nature.com
Cognition and behavior emerge from brain network interactions, such that investigating
causal interactions should be central to the study of brain function. Approaches that …

Noise contributions to the fMRI signal: An overview

TT Liu - NeuroImage, 2016‏ - Elsevier
The ability to discriminate signal from noise plays a key role in the analysis and
interpretation of functional magnetic resonance imaging (fMRI) measures of brain activity …

Artifact removal in the context of group ICA: A comparison of single‐subject and group approaches

Y Du, EA Allen, H He, J Sui, L Wu… - Human brain …, 2016‏ - Wiley Online Library
Independent component analysis (ICA) has been widely applied to identify intrinsic brain
networks from fMRI data. Group ICA computes group‐level components from all data and …

[PDF][PDF] Ten key observations on the analysis of resting-state functional MR imaging data using independent component analysis

VD Calhoun, N de Lacy - Neuroimaging Clinics of North America, 2017‏ - Elsevier
Independent component analysis (ICA) has grown to be a widely used and continually
develo** staple for analyzing fMRI functional connectivity data. In this paper we discuss …

Machine learning identifies “rsfMRI epilepsy networks” in temporal lobe epilepsy

RD Bharath, R Panda, J Raj, S Bhardwaj, S Sinha… - European …, 2019‏ - Springer
Objectives Experimental models have provided compelling evidence for the existence of
neural networks in temporal lobe epilepsy (TLE). To identify and validate the possible …

Data-driven approaches to neuroimaging biomarkers for neurological and psychiatric disorders: emerging approaches and examples

VD Calhoun, GD Pearlson, J Sui - Current opinion in neurology, 2021‏ - journals.lww.com
The search for clinically relevant neuroimaging biomarkers for neurological and psychiatric
disorders is rapidly accelerating. Here, we highlight some of these aspects, provide recent …