Structural mechanism of bacteriophage lambda tail's interaction with the bacterial receptor

X Ge, J Wang - Nature Communications, 2024 - nature.com
Bacteriophage infection, a pivotal process in microbiology, initiates with the phage's tail
recognizing and binding to the bacterial cell surface, which then mediates the injection of …

Rapid bacteria-phage coevolution drives the emergence of multiscale networks

JM Borin, JJ Lee, A Lucia-Sanz, KR Gerbino, JS Weitz… - Science, 2023 - science.org
Interactions between species catalyze the evolution of multiscale ecological networks,
including both nested and modular elements that regulate the function of diverse …

Symbiosis in digital evolution: Past, present, and future

AE Vostinar, KG Skocelas, A Lale**i… - Frontiers in Ecology and …, 2021 - frontiersin.org
Symbiosis, the living together of unlike organisms as symbionts, is ubiquitous in the natural
world. Symbioses occur within and across all scales of life, from microbial to macro-faunal …

Environment-independent distribution of mutational effects emerges from microscopic epistasis

SM Ardell, A Martsul, MS Johnson, S Kryazhimskiy - Science, 2024 - science.org
Predicting how new mutations alter phenotypes is difficult because mutational effects vary
across genotypes and environments. Recently discovered global epistasis, in which the …

Experimental evolution of the TolC-receptor phage U136B functionally identifies a tail fiber protein involved in adsorption through strong parallel adaptation

AR Burmeister, E Tzintzun-Tapia, C Roush… - Applied and …, 2023 - journals.asm.org
Bacteriophages have received recent attention for their therapeutic potential to treat
antibiotic-resistant bacterial infections. One particular idea in phage therapy is to use …

A trait-based approach to predicting viral host-range evolvability

HM Strobel, EC Stuart, JR Meyer - Annual Review of Virology, 2022 - annualreviews.org
Predicting the evolution of virus host range has proven to be extremely difficult, in part
because of the sheer diversity of viruses, each with unique biology and ecological …

Stepwise Evolution of E. coli C and ΦX174 Reveals Unexpected Lipopolysaccharide (LPS) Diversity

J Romeyer Dherbey, L Parab, J Gallie… - Molecular Biology and …, 2023 - academic.oup.com
Phage therapy is a promising method for the treatment of multidrug-resistant bacterial
infections. However, its long-term efficacy depends on understanding the evolutionary …

Comparison of bacterial suppression by phage cocktails, dual‐receptor generalists, and coevolutionarily trained phages

JM Borin, JJ Lee, KR Gerbino… - Evolutionary …, 2023 - Wiley Online Library
The evolution and spread of antibiotic‐resistant bacteria have renewed interest in phage
therapy, the use of bacterial viruses (phages) to combat bacterial infections. The delivery of …

Competition-driven eco-evolutionary feedback reshapes bacteriophage lambda's fitness landscape and enables speciation

MB Doud, A Gupta, V Li, SJ Medina… - Nature …, 2024 - nature.com
A major challenge in evolutionary biology is explaining how populations navigate rugged
fitness landscapes without getting trapped on local optima. One idea illustrated by adaptive …

Bacterial resistance response and resource availability mediate viral coexistence

L Butt, JR Meyer, RJ Lindsay… - Journal of …, 2024 - academic.oup.com
Viruses that infect bacteria, known as bacteriophages or phages, are the most prevalent
entities on Earth. Their genetic diversity in nature is well documented, and members of …