Spatial components of molecular tissue biology
Methods for profiling RNA and protein expression in a spatially resolved manner are rapidly
evolving, making it possible to comprehensively characterize cells and tissues in health and …
evolving, making it possible to comprehensively characterize cells and tissues in health and …
From whole-mount to single-cell spatial assessment of gene expression in 3D
LN Waylen, HT Nim, LG Martelotto… - Communications …, 2020 - nature.com
Unravelling spatio-temporal patterns of gene expression is crucial to understanding core
biological principles from embryogenesis to disease. Here we review emerging …
biological principles from embryogenesis to disease. Here we review emerging …
A spatially resolved atlas of the human lung characterizes a gland-associated immune niche
E Madissoon, AJ Oliver, V Kleshchevnikov… - Nature Genetics, 2023 - nature.com
Single-cell transcriptomics has allowed unprecedented resolution of cell types/states in the
human lung, but their spatial context is less well defined. To (re) define tissue architecture of …
human lung, but their spatial context is less well defined. To (re) define tissue architecture of …
Unified classification of mouse retinal ganglion cells using function, morphology, and gene expression
Classification and characterization of neuronal types are critical for understanding their
function and dysfunction. Neuronal classification schemes typically rely on measurements of …
function and dysfunction. Neuronal classification schemes typically rely on measurements of …
Cross-species RNA-seq for deciphering host–microbe interactions
AJ Westermann, J Vogel - Nature Reviews Genetics, 2021 - nature.com
The human body is constantly exposed to microorganisms, which entails manifold
interactions between human cells and diverse commensal or pathogenic bacteria. The …
interactions between human cells and diverse commensal or pathogenic bacteria. The …
[PDF][PDF] Protective alleles and precision healthcare in crewed spaceflight
Common and rare alleles are now being annotated across millions of human genomes, and
omics technologies are increasingly being used to develop health and treatment …
omics technologies are increasingly being used to develop health and treatment …
Decoding the spermatogenesis program: new insights from transcriptomic analyses
Spermatogenesis is a complex differentiation process coordinated spatiotemporally across
and along seminiferous tubules. Cellular heterogeneity has made it challenging to obtain …
and along seminiferous tubules. Cellular heterogeneity has made it challenging to obtain …
[HTML][HTML] A new era for plant science: spatial single-cell transcriptomics
S Giacomello - Current opinion in plant biology, 2021 - Elsevier
To achieve a complete understanding of how organisms function, there is a need to study
their fundamental unit, the cell, in its spatial context. In recent years, we have seen fast …
their fundamental unit, the cell, in its spatial context. In recent years, we have seen fast …
Biofilms as more than the sum of their parts: lessons from developmental biology
Although our understanding of both bacterial cell physiology and the complex behaviors
exhibited by bacterial biofilms is expanding rapidly, we cannot yet sum the behaviors of …
exhibited by bacterial biofilms is expanding rapidly, we cannot yet sum the behaviors of …
A review of spatial profiling technologies for characterizing the tumor microenvironment in immuno-oncology
Interpreting the mechanisms and principles that govern gene activity and how these genes
work according to-their cellular distribution in organisms has profound implications for …
work according to-their cellular distribution in organisms has profound implications for …