Mass spectrometry‐based forest tree metabolomics

AM Rodrigues, C Miguel, I Chaves… - Mass spectrometry …, 2021 - Wiley Online Library
Research in forest tree species has advanced slowly when compared with other agricultural
crops and model organisms, mainly due to the long‐life cycles, large genome sizes, and …

Transcription factor proteomics—tools, applications, and challenges

J Simicevic, B Deplancke - Proteomics, 2017 - Wiley Online Library
Transcription factors (TFs) are a family of DNA‐binding proteins whose gene regulatory
capabilities are of vital importance in defining the molecular state of a cell. Despite their …

Sma3s: a universal tool for easy functional annotation of proteomes and transcriptomes

CS Casimiro‐Soriguer, A Muñoz‐Mérida… - …, 2017 - Wiley Online Library
The current cheapening of next‐generation sequencing has led to an enormous growth in
the number of sequenced genomes and transcriptomes, allowing wet labs to get the …

Integrative analysis of the nuclear proteome in Pinus radiata reveals thermopriming coupled to epigenetic regulation

L Lamelas, L Valledor, M Escandón… - Journal of …, 2020 - academic.oup.com
Despite it being an important issue in the context of climate change, for most plant species it
is not currently known how abiotic stresses affect nuclear proteomes and mediate memory …

[HTML][HTML] Chloroplast proteomics reveals transgenerational cross-stress priming in Pinus radiata

L García-Campa, S Guerrero, L Lamelas… - Environmental and …, 2022 - Elsevier
Plants do have stress memory and chloroplast signaling has been revealed as crucial
element to acquire and extend this memory into future generations, allowing plant …

Integrated physiological, proteomic, and metabolomic analysis of ultra violet (UV) stress responses and adaptation mechanisms in Pinus radiata

J Pascual, MJ Cañal, M Escandon, M Meijon… - Molecular & Cellular …, 2017 - ASBMB
Globally expected changes in environmental conditions, especially the increase of UV
irradiation, necessitate extending our knowledge of the mechanisms mediating tree species …

System-wide analysis of short-term response to high temperature in Pinus radiata

M Escandón, L Valledor, J Pascual… - Journal of …, 2017 - academic.oup.com
Pinus radiata seedlings, the most widely planted pine species in the world, were exposed to
temperatures within a range mimicking future scenarios based on current models of heat …

Proteomics research in forest trees: A 2012-2022 update

MA Castillejo, J Pascual, JV Jorrín-Novo… - Frontiers in Plant …, 2023 - frontiersin.org
This review is a compilation of proteomic studies on forest tree species published in the last
decade (2012-2022), mostly focused on the most investigated species, including …

Proteomics, Holm Oak (Quercus ilex L.) and Other Recalcitrant and Orphan Forest Tree Species: How do They See Each Other?

MD Rey, MÁ Castillejo, R Sánchez-Lucas… - International journal of …, 2019 - mdpi.com
Proteomics has had a big impact on plant biology, considered as a valuable tool for several
forest species, such as Quercus, Pines, Poplars, and Eucalyptus. This review assesses the …

Characterization of the nuclear proteome of Chlamydomonas in response to salt stress

L de Oliveira Magalhães, F Nunes de Mello… - Phycology, 2022 - mdpi.com
Microalgae biomass is considered a promising alternative feedstock for biodiesel production
due to its high productivity of neutral lipids, especially under abiotic stress conditions …