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Predicting protein function from sequence and structure
While the number of sequenced genomes continues to grow, experimentally verified
functional annotation of whole genomes remains patchy. Structural genomics projects are …
functional annotation of whole genomes remains patchy. Structural genomics projects are …
Keep your fingers off my DNA: protein–protein interactions mediated by C2H2 zinc finger domains
Abstract Cys2-His2 (C2H2) zinc finger domains (ZFs) were originally identified as DNA-
binding domains, and uncharacterized domains are typically assumed to function in DNA …
binding domains, and uncharacterized domains are typically assumed to function in DNA …
The yak genome and adaptation to life at high altitude
Domestic yaks (Bos grunniens) provide meat and other necessities for Tibetans living at
high altitude on the Qinghai-Tibetan Plateau and in adjacent regions. Comparison between …
high altitude on the Qinghai-Tibetan Plateau and in adjacent regions. Comparison between …
The genome sequence of sweet cherry (Prunus avium) for use in genomics-assisted breeding
K Shirasawa, K Isuzugawa, M Ikenaga, Y Saito… - DNA …, 2017 - academic.oup.com
We determined the genome sequence of sweet cherry (Prunus avium) using next-
generation sequencing technology. The total length of the assembled sequences was 272.4 …
generation sequencing technology. The total length of the assembled sequences was 272.4 …
High-throughput functional annotation and data mining with the Blast2GO suite
Functional genomics technologies have been widely adopted in the biological research of
both model and non-model species. An efficient functional annotation of DNA or protein …
both model and non-model species. An efficient functional annotation of DNA or protein …
InterPro: the integrative protein signature database
Abstract The InterPro database (http://www. ebi. ac. uk/interpro/) integrates together
predictive models or 'signatures' representing protein domains, families and functional sites …
predictive models or 'signatures' representing protein domains, families and functional sites …
Protein structure homology modeling using SWISS-MODEL workspace
Homology modeling aims to build three-dimensional protein structure models using
experimentally determined structures of related family members as templates. SWISS …
experimentally determined structures of related family members as templates. SWISS …
[HTML][HTML] Population genomics reveal recent speciation and rapid evolutionary adaptation in polar bears
Polar bears are uniquely adapted to life in the High Arctic and have undergone drastic
physiological changes in response to Arctic climates and a hyperlipid diet of primarily …
physiological changes in response to Arctic climates and a hyperlipid diet of primarily …
A high quality draft consensus sequence of the genome of a heterozygous grapevine variety
Background Worldwide, grapes and their derived products have a large market. The
cultivated grape species Vitis vinifera has potential to become a model for fruit trees …
cultivated grape species Vitis vinifera has potential to become a model for fruit trees …
Type VI secretion apparatus and phage tail-associated protein complexes share a common evolutionary origin
Protein secretion is a common property of pathogenic microbes. Gram-negative bacterial
pathogens use at least 6 distinct extracellular protein secretion systems to export proteins …
pathogens use at least 6 distinct extracellular protein secretion systems to export proteins …