The evolutionary genomics of species' responses to climate change

JA Aguirre-Liguori, S Ramírez-Barahona… - Nature Ecology & …, 2021‏ - nature.com
Climate change is a threat to biodiversity. One way that this threat manifests is through
pronounced shifts in the geographical range of species over time. To predict these shifts …

Finding the genomic basis of local adaptation: pitfalls, practical solutions, and future directions

S Hoban, JL Kelley, KE Lotterhos… - The American …, 2016‏ - journals.uchicago.edu
Uncovering the genetic and evolutionary basis of local adaptation is a major focus of
evolutionary biology. The recent development of cost-effective methods for obtaining high …

Neutral and adaptive genetic diversity in plants: An overview

MY Chung, J Merilä, J Li, K Mao… - Frontiers in Ecology …, 2023‏ - frontiersin.org
Genetic diversity is a prerequisite for evolutionary change in all kinds of organisms. It is
generally acknowledged that populations lacking genetic variation are unable to evolve in …

A practical guide to environmental association analysis in landscape genomics

C Rellstab, F Gugerli, AJ Eckert, AM Hancock… - Molecular …, 2015‏ - Wiley Online Library
Landscape genomics is an emerging research field that aims to identify the environmental
factors that shape adaptive genetic variation and the gene variants that drive local …

Re-thinking the environment in landscape genomics

B Dauphin, C Rellstab, RO Wüest, DN Karger… - Trends in Ecology & …, 2023‏ - cell.com
Detecting the extrinsic selective pressures sha** genomic variation is critical for a better
understanding of adaptation and for forecasting evolutionary responses of natural …

LFMM 2: fast and accurate inference of gene-environment associations in genome-wide studies

K Caye, B Jumentier, J Lepeule… - Molecular biology and …, 2019‏ - academic.oup.com
Gene-environment association (GEA) studies are essential to understand the past and
ongoing adaptations of organisms to their environment, but those studies are complicated by …

Genome-wide scan for adaptive divergence and association with population-specific covariates

M Gautier - Genetics, 2015‏ - academic.oup.com
In population genomics studies, accounting for the neutral covariance structure across
population allele frequencies is critical to improve the robustness of genome-wide scan …

A decade of seascape genetics: contributions to basic and applied marine connectivity

KA Selkoe, CCD Aloia, ED Crandall, M Iacchei… - Marine Ecology …, 2016‏ - int-res.com
Seascape genetics, a term coined in 2006, is a fast growing area of population genetics that
draws on ecology, oceanography and geography to address challenges in basic …

On the maintenance of genetic variation and adaptation to environmental change: considerations from population genomics in fishes

L Bernatchez - Journal of Fish Biology, 2016‏ - Wiley Online Library
The first goal of this paper was to overview modern approaches to local adaptation, with a
focus on the use of population genomics data to detect signals of natural selection in fishes …

Comparing the Performance of Microsatellites and RADseq in Population Genetic Studies: Analysis of Data for Pike (Esox lucius) and a Synthesis of Previous Studies

J Sunde, Y Yıldırım, P Tibblin, A Forsman - Frontiers in genetics, 2020‏ - frontiersin.org
Population genetic studies reveal biodiversity patterns and inform about drivers of
evolutionary differentiation and adaptation, including gene flow, drift and selection. This can …