DNA barcoding, an effective tool for species identification: a review

S Antil, JS Abraham, S Sripoorna, S Maurya… - Molecular biology …, 2023 - Springer
DNA barcoding is a powerful taxonomic tool to identify and discover species. DNA
barcoding utilizes one or more standardized short DNA regions for taxon identification. With …

Biochemistry and evolution of anaerobic energy metabolism in eukaryotes

M Müller, M Mentel, JJ van Hellemond… - Microbiology and …, 2012 - journals.asm.org
Major insights into the phylogenetic distribution, biochemistry, and evolutionary significance
of organelles involved in ATP synthesis (energy metabolism) in eukaryotes that thrive in …

Culture of previously uncultured members of the human gut microbiota by culturomics

JC Lagier, S Khelaifia, MT Alou, S Ndongo… - Nature …, 2016 - nature.com
Metagenomics revolutionized the understanding of the relations among the human
microbiome, health and diseases, but generated a countless number of sequences that …

Protist taxonomic and functional diversity in soil, freshwater and marine ecosystems

D Singer, CVW Seppey, G Lentendu, M Dunthorn… - Environment …, 2021 - Elsevier
Protists dominate eukaryotic diversity and play key functional roles in all ecosystems,
particularly by catalyzing carbon and nutrient cycling. To date, however, a comparative …

Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests

F Mahé, C de Vargas, D Bass, L Czech… - Nature ecology & …, 2017 - nature.com
High animal and plant richness in tropical rainforest communities has long intrigued
naturalists. It is unknown if similar hyperdiversity patterns are reflected at the microbial scale …

Patterns of rare and abundant marine microbial eukaryotes

R Logares, S Audic, D Bass, L Bittner, C Boutte… - Current Biology, 2014 - cell.com
Background Biological communities are normally composed of a few abundant and many
rare species. This pattern is particularly prominent in microbial communities, in which most …

Midgut Microbiota of the Malaria Mosquito Vector Anopheles gambiae and Interactions with Plasmodium falciparum Infection

A Boissière, MT Tchioffo, D Bachar, L Abate… - PLoS …, 2012 - journals.plos.org
The susceptibility of Anopheles mosquitoes to Plasmodium infections relies on complex
interactions between the insect vector and the malaria parasite. A number of studies have …

Sequencing our way towards understanding global eukaryotic biodiversity

HM Bik, DL Porazinska, S Creer, JG Caporaso… - Trends in ecology & …, 2012 - cell.com
Microscopic eukaryotes are abundant, diverse and fill critical ecological roles across every
ecosystem on Earth, yet there is a well-recognized gap in understanding of their global …

Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies

J Zimmermann, G Glöckner, R Jahn… - Molecular ecology …, 2015 - Wiley Online Library
Diatoms are frequently used for water quality assessments; however, identification to
species level is difficult, time‐consuming and needs in‐depth knowledge of the organisms …

pr2‐primers: An 18S rRNA primer database for protists

D Vaulot, S Geisen, F Mahé… - Molecular Ecology …, 2022 - Wiley Online Library
Metabarcoding of microbial eukaryotes (collectively known as protists) has developed
tremendously in the last decade, almost solely relying on the 18S rRNA gene. As microbial …