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Prospects and challenges of implementing DNA metabarcoding for high-throughput insect surveillance
Trap-based surveillance strategies are widely used for monitoring of invasive insect species,
aiming to detect newly arrived exotic taxa as well as track the population levels of …
aiming to detect newly arrived exotic taxa as well as track the population levels of …
High-throughput metagenomic technologies for complex microbial community analysis: open and closed formats
Understanding the structure, functions, activities and dynamics of microbial communities in
natural environments is one of the grand challenges of 21st century science. To address this …
natural environments is one of the grand challenges of 21st century science. To address this …
Eukaryotic plankton diversity in the sunlit ocean
Marine plankton support global biological and geochemical processes. Surveys of their
biodiversity have hitherto been geographically restricted and have not accounted for the full …
biodiversity have hitherto been geographically restricted and have not accounted for the full …
Marine protist diversity in E uropean coastal waters and sediments as revealed by high‐throughput sequencing
Although protists are critical components of marine ecosystems, they are still poorly
characterized. Here we analysed the taxonomic diversity of planktonic and benthic protist …
characterized. Here we analysed the taxonomic diversity of planktonic and benthic protist …
Censusing marine eukaryotic diversity in the twenty-first century
The ocean constitutes one of the vastest and richest biomes on our planet. Most recent
estimations, all based on indirect approaches, suggest that there are millions of marine …
estimations, all based on indirect approaches, suggest that there are millions of marine …
Perspectives from ten years of protist studies by high‐throughput metabarcoding
During the last decade, high‐throughput metabarcoding became routine for analyzing
protistan diversity and distributions in nature. Amid a multitude of exciting findings, scientists …
protistan diversity and distributions in nature. Amid a multitude of exciting findings, scientists …
Comparative analyses of the V4 and V9 regions of 18S rDNA for the extant eukaryotic community using the Illumina platform
Illumina sequencing is a representative tool for understanding the massive diversity of
microbial eukaryotes in natural ecosystems. Here, we investigated the eukaryotic community …
microbial eukaryotes in natural ecosystems. Here, we investigated the eukaryotic community …
Diversity and ecology of Radiolaria in modern oceans
T Biard - Environmental Microbiology, 2022 - Wiley Online Library
Among the many inhabitants of planktonic communities, several lineages have
biomineralized intricate skeletons. These have existed for millions of years and include the …
biomineralized intricate skeletons. These have existed for millions of years and include the …
Evaluation of the reproducibility of amplicon sequencing with Illumina MiSeq platform
Illumina's MiSeq has become the dominant platform for gene amplicon sequencing in
microbial ecology studies; however, various technical concerns, such as reproducibility, still …
microbial ecology studies; however, various technical concerns, such as reproducibility, still …
The diversity and biogeography of abundant and rare intertidal marine microeukaryotes explained by environment and dispersal limitation
Benthic microeukaryotes are key ecosystem drivers in marine sandy beaches, an important
and dynamic environment; however, little is known about their diversity and biogeography …
and dynamic environment; however, little is known about their diversity and biogeography …