[HTML][HTML] The persistent question of potassium channel permeation mechanisms
Potassium channels play critical roles in many physiological processes, providing a
selective permeation route for K+ ions in and out of a cell, by employing a carefully designed …
selective permeation route for K+ ions in and out of a cell, by employing a carefully designed …
Computational spectroscopy of complex systems
TLC Jansen - The Journal of Chemical Physics, 2021 - pubs.aip.org
Numerous linear and non-linear spectroscopic techniques have been developed to
elucidate structural and functional information of complex systems ranging from natural …
elucidate structural and functional information of complex systems ranging from natural …
[HTML][HTML] Structure and dynamics of phospholipids in membranes elucidated by combined use of NMR and vibrational spectroscopies
H Akutsu - Biochimica et Biophysica Acta (BBA)-Biomembranes, 2020 - Elsevier
NMR is a sophisticated method for investigation of structure and dynamics of lipid and
protein molecules in membranes. Vibrational spectroscopy is also powerful because of …
protein molecules in membranes. Vibrational spectroscopy is also powerful because of …
AIM: a map** program for infrared spectroscopy of proteins
KE van Adrichem, TLC Jansen - Journal of chemical theory and …, 2022 - ACS Publications
Here, we present a new analysis program, AIM, that allows extracting the vibrational amide-I
Hamiltonian using molecular dynamics trajectories for protein infrared spectroscopy …
Hamiltonian using molecular dynamics trajectories for protein infrared spectroscopy …
Permeability enhancement of Kv1. 2 potassium channel by a terahertz electromagnetic field
X Zhao, W Ding, H Wang, Y Wang, Y Liu… - The Journal of …, 2023 - pubs.aip.org
As biomolecules vibrate and rotate in the terahertz band, the biological effects of terahertz
electromagnetic fields have drawn considerable attention from the physiological and …
electromagnetic fields have drawn considerable attention from the physiological and …
Designing artificial ion channels with strict K+/Na+ selectivity toward next-generation electric-eel-mimetic ionic power generation
ABSTRACT A biological potassium channel is> 1000 times more permeable to K+ than to
Na+ and exhibits a giant permeation rate of∼ 108 ions/s. It is a great challenge to construct …
Na+ and exhibits a giant permeation rate of∼ 108 ions/s. It is a great challenge to construct …
Water inside the Selectivity Filter of a K+ Ion Channel: Structural Heterogeneity, Picosecond Dynamics, and Hydrogen Bonding
Water inside biological ion channels regulates the key properties of these proteins, such as
selectivity, ion conductance, and gating. In this article, we measure the picosecond spectral …
selectivity, ion conductance, and gating. In this article, we measure the picosecond spectral …
CH Mode Mixing Determines the Band Shape of the Carboxylate Symmetric Stretch in Apo-EDTA, Ca2+–EDTA, and Mg2+–EDTA
The infrared spectra of EDTA complexed with Ca2+ and Mg2+ contain, to date, unidentified
vibrational bands. This study assigns the peaks in the linear and two-dimensional infrared …
vibrational bands. This study assigns the peaks in the linear and two-dimensional infrared …
A bottom-up approach to the ion recognition mechanism of K+ channels from laser spectroscopy of hydrated partial peptide–alkali metal ion complexes
K+ channels allow selective permeation of K+, but not physiologically abundant Na+, at
almost diffusion limit rates. The conduction mechanism of K+ channels is still controversial …
almost diffusion limit rates. The conduction mechanism of K+ channels is still controversial …
Carboxylate binding prefers two cations to one
Almost all studies of specific ion binding by carboxylates (–COO−) have considered only a
single cation, but clustering of ions and ligands is a common phenomenon. We apply …
single cation, but clustering of ions and ligands is a common phenomenon. We apply …