The ubiquitin code

D Komander, M Rape - Annual review of biochemistry, 2012 - annualreviews.org
The posttranslational modification with ubiquitin, a process referred to as ubiquitylation,
controls almost every process in cells. Ubiquitin can be attached to substrate proteins as a …

Protein quality control in the secretory pathway

Z Sun, JL Brodsky - Journal of Cell Biology, 2019 - rupress.org
Protein folding is inherently error prone, especially in the endoplasmic reticulum (ER). Even
with an elaborate network of molecular chaperones and protein folding facilitators …

[HTML][HTML] Ubiquitination of phosphatidylethanolamine in organellar membranes

J Sakamaki, KL Ode, Y Kurikawa, HR Ueda… - Molecular cell, 2022 - cell.com
The covalent conjugation of ubiquitin family proteins is a widespread post-translational
protein modification. In the ubiquitin family, the ATG8 subfamily is exceptional because it is …

Maintenance of organellar protein homeostasis by ER-associated degradation and related mechanisms

MK Lemberg, K Strisovsky - Molecular Cell, 2021 - cell.com
Protein homeostasis mechanisms are fundamentally important to match cellular needs and
to counteract stress conditions. A fundamental challenge is to understand how defective …

Ubiquitination of non-protein substrates

J Sakamaki, N Mizushima - Trends in Cell Biology, 2023 - cell.com
The covalent attachment of ubiquitin is a common regulatory mechanism in various proteins.
Although it has long been thought that the substrates of ubiquitination are limited to proteins …

Interaction map** of endoplasmic reticulum ubiquitin ligases identifies modulators of innate immune signalling

EJ Fenech, F Lari, PD Charles, R Fischer… - Elife, 2020 - elifesciences.org
Ubiquitin ligases (E3s) embedded in the endoplasmic reticulum (ER) membrane regulate
essential cellular activities including protein quality control, calcium flux, and sterol …

Hierarchical modularity and the evolution of genetic interactomes across species

CJ Ryan, A Roguev, K Patrick, J Xu, H Jahari, Z Tong… - Molecular cell, 2012 - cell.com
To date, cross-species comparisons of genetic interactomes have been restricted to small or
functionally related gene sets, limiting our ability to infer evolutionary trends. To facilitate a …

Endosome and Golgi‐associated degradation (EGAD) of membrane proteins regulates sphingolipid metabolism

O Schmidt, Y Weyer, V Baumann, MA Widerin… - The EMBO …, 2019 - embopress.org
Cellular homeostasis requires the ubiquitin‐dependent degradation of membrane proteins.
This was assumed to be mediated exclusively either by endoplasmic reticulum‐associated …

Regulation of Sterol Biosynthesis in the Human Fungal Pathogen Aspergillus fumigatus: Opportunities for Therapeutic Development

S Dhingra, RA Cramer - Frontiers in microbiology, 2017 - frontiersin.org
Sterols are a major component of eukaryotic cell membranes. For human fungal infections
caused by the filamentous fungus Aspergillus fumigatus, antifungal drugs that target sterol …

Cholesterol sensor SCAP contributes to sorafenib resistance by regulating autophagy in hepatocellular carcinoma

D Li, Y Yao, Y Rao, X Huang, L Wei, Z You… - Journal of Experimental …, 2022 - Springer
Background Hepatocellular carcinoma (HCC) is one of the most malignant tumors and the
fourth leading cause of cancer-related death worldwide. Sorafenib is currently …