AE-GPT: using large language models to extract adverse events from surveillance reports-a use case with influenza vaccine adverse events

Y Li, J Li, J He, C Tao - Plos one, 2024‏ - journals.plos.org
Though Vaccines are instrumental in global health, mitigating infectious diseases and
pandemic outbreaks, they can occasionally lead to adverse events (AEs). Recently, Large …

RefAI: a GPT-powered retrieval-augmented generative tool for biomedical literature recommendation and summarization

Y Li, J Zhao, M Li, Y Dang, E Yu, J Li… - Journal of the …, 2024‏ - academic.oup.com
Objectives Precise literature recommendation and summarization are crucial for biomedical
professionals. While the latest iteration of generative pretrained transformer (GPT) …

[HTML][HTML] Bibliometric analysis of natural language processing using CiteSpace and VOSviewer

X Chen, W Tian, H Fang - Natural Language Processing Journal, 2024‏ - Elsevier
Abstract Natural Language Processing (NLP) holds a pivotal position in the domains of
computer science and artificial intelligence (AI). Its focus is on exploring and develo** …

[HTML][HTML] Adverse events of COVID-19 vaccines in the United States: temporal and spatial analysis

Y Li, J Li, Y Dang, Y Chen, C Tao - JMIR Public Health and …, 2024‏ - publichealth.jmir.org
Background: The COVID-19 pandemic, caused by SARS-CoV-2, has had a profound impact
worldwide, leading to widespread morbidity and mortality. Vaccination against COVID-19 is …

Relation extraction using large language models: a case study on acupuncture point locations

Y Li, X Peng, J Li, X Zuo, S Peng, D Pei… - Journal of the …, 2024‏ - academic.oup.com
Objective In acupuncture therapy, the accurate location of acupoints is essential for its
effectiveness. The advanced language understanding capabilities of large language models …

[HTML][HTML] Artificial intelligence and big data for pharmacovigilance and patient safety

MA Shamim, MA Shamim, P Arora, P Dwivedi - Journal of Medicine …, 2024‏ - Elsevier
Pharmacovigilance, the science of monitoring drug safety, plays a crucial role in identifying
and mitigating adverse drug reactions (ADRs). However, underreporting in …

Map** vaccine names in clinical trials to vaccine ontology using cascaded fine-tuned domain-specific language models

J Li, Y Li, Y Pan, J Guo, Z Sun, F Li, Y He… - Journal of Biomedical …, 2024‏ - Springer
Background Vaccines have revolutionized public health by providing protection against
infectious diseases. They stimulate the immune system and generate memory cells to …

Improving tabular data extraction in scanned laboratory reports using deep learning models

Y Li, Q Wei, X Chen, J Li, C Tao, H Xu - Journal of Biomedical Informatics, 2024‏ - Elsevier
Objective Medical laboratory testing is essential in healthcare, providing crucial data for
diagnosis and treatment. Nevertheless, patients' lab testing results are often transferred via …

Post-marketing surveillance of anticancer drugs using natural language processing of electronic medical records

Y Kawazoe, K Shimamoto, T Seki, M Tsuchiya… - npj Digital …, 2024‏ - nature.com
This study demonstrates that adverse events (AEs) extracted using natural language
processing (NLP) from clinical texts reflect the known frequencies of AEs associated with …

VaxBot-HPV: a GPT-based chatbot for answering HPV vaccine-related questions

Y Li, J Li, M Li, E Yu, D Rhee, M Amith, L Tang… - JAMIA …, 2025‏ - academic.oup.com
Abstract Objective Human Papillomavirus (HPV) vaccine is an effective measure to prevent
and control the diseases caused by HPV. However, widespread misinformation and vaccine …