Deep learning for short-term traffic flow prediction

NG Polson, VO Sokolov - Transportation Research Part C: Emerging …, 2017 - Elsevier
We develop a deep learning model to predict traffic flows. The main contribution is
development of an architecture that combines a linear model that is fitted using ℓ 1 …

Pan-neuronal calcium imaging with cellular resolution in freely swimming zebrafish

DH Kim, J Kim, JC Marques, A Grama… - Nature …, 2017 - nature.com
Calcium imaging with cellular resolution typically requires an animal to be tethered under a
microscope, which substantially restricts the range of behaviors that can be studied. To …

Trend filtering on graphs

YX Wang, J Sharpnack, AJ Smola… - Journal of Machine …, 2016 - jmlr.org
We introduce a family of adaptive estimators on graphs, based on penalizing the l 1 norm of
discrete graph differences. This generalizes the idea of trend filtering (Kim et al., 2009; …

Modular proximal optimization for multidimensional total-variation regularization

A Barbero, S Sra - Journal of Machine Learning Research, 2018 - jmlr.org
We study TV regularization, a widely used technique for eliciting structured sparsity. In
particular, we propose efficient algorithms for computing prox-operators for lp-norm TV. The …

Nonparametric coalescent inference of mutation spectrum history and demography

WS DeWitt, KD Harris, AP Ragsdale… - Proceedings of the …, 2021 - pnas.org
As populations boom and bust, the accumulation of genetic diversity is modulated, encoding
histories of living populations in present-day variation. Many methods exist to decode these …

Data fission: splitting a single data point

J Leiner, B Duan, L Wasserman… - Journal of the American …, 2023 - Taylor & Francis
Suppose we observe a random vector X from some distribution in a known family with
unknown parameters. We ask the following question: when is it possible to split X into two …

An augmented ADMM algorithm with application to the generalized lasso problem

Y Zhu - Journal of Computational and Graphical Statistics, 2017 - Taylor & Francis
In this article, we present a fast and stable algorithm for solving a class of optimization
problems that arise in many statistical estimation procedures, such as sparse fused lasso …

Efficient implementations of the generalized lasso dual path algorithm

TB Arnold, RJ Tibshirani - Journal of Computational and Graphical …, 2016 - Taylor & Francis
We consider efficient implementations of the generalized lasso dual path algorithm given by
Tibshirani and Taylor in. We first describe a generic approach that covers any penalty matrix …

Conserved non-AUG uORFs revealed by a novel regression analysis of ribosome profiling data

P Spealman, AW Naik, GE May, S Kuersten… - Genome …, 2018 - genome.cshlp.org
Upstream open reading frames (uORFs), located in transcript leaders (5′ UTRs), are potent
cis-acting regulators of translation and mRNA turnover. Recent genome-wide ribosome …

ADMM penalty parameter selection by residual balancing

B Wohlberg - arxiv preprint arxiv:1704.06209, 2017 - arxiv.org
Appropriate selection of the penalty parameter is crucial to obtaining good performance from
the Alternating Direction Method of Multipliers (ADMM). While analytic results for optimal …