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Biocomputing based on DNA strand displacement reactions
The high sequence specificity and precise base complementary pairing principle of DNA
provides a rich orthogonal molecular library for molecular programming, making it one of the …
provides a rich orthogonal molecular library for molecular programming, making it one of the …
Prediction and control in DNA nanotechnology
DNA nanotechnology is a rapidly develo** field that uses DNA as a building material for
nanoscale structures. Key to the field's development has been the ability to accurately …
nanoscale structures. Key to the field's development has been the ability to accurately …
Enzyme-free nucleic acid dynamical systems
INTRODUCTION Embedded controllers enable complex functionality in man-made
mechanical and electronic devices. Similarly, intricate regulatory networks within living …
mechanical and electronic devices. Similarly, intricate regulatory networks within living …
Programmable chemical controllers made from DNA
Biological organisms use complex molecular networks to navigate their environment and
regulate their internal state. The development of synthetic systems with similar capabilities …
regulate their internal state. The development of synthetic systems with similar capabilities …
Modeling DNA-strand displacement reactions in the presence of base-pair mismatches
Toehold-mediated strand displacement is the most abundantly used method to achieve
dynamic switching in DNA-based nanotechnology. An “invader” strand binds to the “toehold” …
dynamic switching in DNA-based nanotechnology. An “invader” strand binds to the “toehold” …
Visual DSD: a design and analysis tool for DNA strand displacement systems
MR Lakin, S Youssef, F Polo, S Emmott… - …, 2011 - academic.oup.com
The Visual DSD (DNA Strand Displacement) tool allows rapid prototy** and analysis of
computational devices implemented using DNA strand displacement, in a convenient web …
computational devices implemented using DNA strand displacement, in a convenient web …
A secure communication scheme of three-variable chaotic coupling synchronization based on DNA chemical reaction networks
J Sun, M Zang, P Liu, Y Wang - IEEE Transactions on Signal …, 2022 - ieeexplore.ieee.org
Three-variable chaotic synchronization has been implemented based on DNA chemical
reaction networks (CRNs) in previous works. However, it is still difficult to realize the …
reaction networks (CRNs) in previous works. However, it is still difficult to realize the …
Computational design of nucleic acid feedback control circuits
The design of synthetic circuits for controlling molecular-scale processes is an important
goal of synthetic biology, with potential applications in future in vitro and in vivo …
goal of synthetic biology, with potential applications in future in vitro and in vivo …
Supervised learning in adaptive DNA strand displacement networks
The development of engineered biochemical circuits that exhibit adaptive behavior is a key
goal of synthetic biology and molecular computing. Such circuits could be used for long-term …
goal of synthetic biology and molecular computing. Such circuits could be used for long-term …
Computing with biological switches and clocks
The complex dynamics of biological systems is primarily driven by molecular interactions
that underpin the regulatory networks of cells. These networks typically contain positive and …
that underpin the regulatory networks of cells. These networks typically contain positive and …