Translating cancer genomics into precision medicine with artificial intelligence: applications, challenges and future perspectives
J Xu, P Yang, S Xue, B Sharma, M Sanchez-Martin… - Human genetics, 2019 - Springer
In the field of cancer genomics, the broad availability of genetic information offered by next-
generation sequencing technologies and rapid growth in biomedical publication has led to …
generation sequencing technologies and rapid growth in biomedical publication has led to …
PubTator central: automated concept annotation for biomedical full text articles
Abstract PubTator Central (https://www. ncbi. nlm. nih. gov/research/pubtator/) is a web
service for viewing and retrieving bioconcept annotations in full text biomedical articles …
service for viewing and retrieving bioconcept annotations in full text biomedical articles …
Pharmacometabolomics informs quantitative radiomics for glioblastoma diagnostic innovation
Applications of omics systems biology technologies have enormous promise for radiology
and diagnostics in surgical fields. In this context, the emerging fields of radiomics (a systems …
and diagnostics in surgical fields. In this context, the emerging fields of radiomics (a systems …
deepBioWSD: effective deep neural word sense disambiguation of biomedical text data
Objective In biomedicine, there is a wealth of information hidden in unstructured narratives
such as research articles and clinical reports. To exploit these data properly, a word sense …
such as research articles and clinical reports. To exploit these data properly, a word sense …
Deep learning of mutation-gene-drug relations from the literature
Background Molecular biomarkers that can predict drug efficacy in cancer patients are
crucial components for the advancement of precision medicine. However, identifying these …
crucial components for the advancement of precision medicine. However, identifying these …
Signalling maps in cancer research: construction and data analysis
Generation and usage of high-quality molecular signalling network maps can be augmented
by standardizing notations, establishing curation workflows and application of computational …
by standardizing notations, establishing curation workflows and application of computational …
PubMed knowledge graph 2.0: Connecting papers, patents, and clinical trials in biomedical science
Papers, patents, and clinical trials are indispensable types of scientific literature in
biomedicine, crucial for knowledge sharing and dissemination. However, these documents …
biomedicine, crucial for knowledge sharing and dissemination. However, these documents …
BERST: An engine and tool for exploring biomedical entities and relationships
T Bai, Y Ge, C Yang, X Liu, L Gong… - Chinese Journal of …, 2019 - Wiley Online Library
To facilitate the search of rapidly growing biomedical knowledge in literature, we developed
a Biomedical entity‐relationship search tool (BERST). It is also a biomedical knowledge …
a Biomedical entity‐relationship search tool (BERST). It is also a biomedical knowledge …
Tool for filtering PubMed search results by sample size
Objective The most used search engine for scientific literature, PubMed, provides tools to
filter results by several fields. When searching for reports on clinical trials, sample size can …
filter results by several fields. When searching for reports on clinical trials, sample size can …
Is the ranking of PubMed similar articles good enough? An evaluation of text similarity methods for three datasets
M Neves, I Schadock, B Eusemann… - The 22nd Workshop …, 2023 - aclanthology.org
The use of seed articles in information retrieval provides many advantages, such as a
longercontext and more details about the topic being searched for. Given a seed article (ie, a …
longercontext and more details about the topic being searched for. Given a seed article (ie, a …