Modern Koopman theory for dynamical systems

SL Brunton, M Budišić, E Kaiser, JN Kutz - arxiv preprint arxiv:2102.12086, 2021 - arxiv.org
The field of dynamical systems is being transformed by the mathematical tools and
algorithms emerging from modern computing and data science. First-principles derivations …

Koopman analysis by the dynamic mode decomposition in wind engineering

CY Li, Z Chen, X Zhang, KT Tim, C Lin - Journal of Wind Engineering and …, 2023 - Elsevier
The Koopman theory, a concept to globally model nonlinear signals by a linear Hamiltonian,
has been at the frontier of fluid mechanics research for the last decade. Wind engineering …

Overcoming the timescale barrier in molecular dynamics: Transfer operators, variational principles and machine learning

C Schütte, S Klus, C Hartmann - Acta Numerica, 2023 - cambridge.org
One of the main challenges in molecular dynamics is overcoming the 'timescale barrier': in
many realistic molecular systems, biologically important rare transitions occur on timescales …

[HTML][HTML] Error bounds for kernel-based approximations of the Koopman operator

FM Philipp, M Schaller, K Worthmann, S Peitz… - Applied and …, 2024 - Elsevier
We consider the data-driven approximation of the Koopman operator for stochastic
differential equations on reproducing kernel Hilbert spaces (RKHS). Our focus is on the …

The multiverse of dynamic mode decomposition algorithms

MJ Colbrook - arxiv preprint arxiv:2312.00137, 2023 - arxiv.org
Dynamic Mode Decomposition (DMD) is a popular data-driven analysis technique used to
decompose complex, nonlinear systems into a set of modes, revealing underlying patterns …

Error analysis of kernel EDMD for prediction and control in the Koopman framework

F Philipp, M Schaller, K Worthmann, S Peitz… - arxiv preprint arxiv …, 2023 - arxiv.org
Extended Dynamic Mode Decomposition (EDMD) is a popular data-driven method to
approximate the Koopman operator for deterministic and stochastic (control) systems. This …

A Stochastic Landscape Approach for Protein Folding State Classification

M Faran, D Ray, S Nag, U Raucci… - Journal of chemical …, 2024 - ACS Publications
Protein folding is a critical process that determines the functional state of proteins. Proper
folding is essential for proteins to acquire their functional three-dimensional structures and …

Koopman analysis of quantum systems

S Klus, F Nüske, S Peitz - Journal of Physics A: Mathematical and …, 2022 - iopscience.iop.org
Koopman operator theory has been successfully applied to problems from various research
areas such as fluid dynamics, molecular dynamics, climate science, engineering, and …

[HTML][HTML] Efficient approximation of molecular kinetics using random Fourier features

F Nüske, S Klus - The Journal of Chemical Physics, 2023 - pubs.aip.org
Slow kinetic processes in molecular systems can be analyzed by computing the dominant
eigenpairs of the Koopman operator or its generator. In this context, the Variational …

tgEDMD: Approximation of the Kolmogorov operator in tensor train format

M Lücke, F Nüske - Journal of Nonlinear Science, 2022 - Springer
Extracting information about dynamical systems from models learned off simulation data has
become an increasingly important research topic in the natural and engineering sciences …