Photoinduced chemistry in fluorescent proteins: curse or blessing?

A Acharya, AM Bogdanov, BL Grigorenko… - Chemical …, 2017 - ACS Publications
Photoinduced reactions play an important role in the photocycle of fluorescent proteins from
the green fluorescent protein (GFP) family. Among such processes are photoisomerization …

[HTML][HTML] Photochromic fluorescence switching from diarylethenes and its applications

C Yun, J You, J Kim, J Huh, E Kim - Journal of Photochemistry and …, 2009 - Elsevier
The review describes the photochromic and fluorescent characteristics of various
diarylethene (DAET) derivatives, and presents recent research into their applications. This …

Multiscale molecular dynamics simulations of polaritonic chemistry

HL Luk, J Feist, JJ Toppari… - Journal of chemical theory …, 2017 - ACS Publications
When photoactive molecules interact strongly with confined light modes as found in
plasmonic structures or optical cavities, new hybrid light-matter states can form, the so-called …

Structural basis for reversible photoswitching in Dronpa

M Andresen, AC Stiel, S Trowitzsch, G Weber… - Proceedings of the …, 2007 - pnas.org
Dronpa is a novel GFP-like fluorescent protein with exceptional light-controlled switching
properties. It may be reversibly switched between a fluorescent on-state and a …

Introduction to QM/MM simulations

G Groenhof - Biomolecular simulations: methods and protocols, 2012 - Springer
Hybrid quantum mechanics/molecular mechanics (QM/MM) simulations have become a
popular tool for investigating chemical reactions in condensed phases. In QM/MM methods …

Intramolecular hydrogen bonding plays a crucial role in the photophysics and photochemistry of the GFP chromophore

G Cui, Z Lan, W Thiel - Journal of the American Chemical Society, 2012 - ACS Publications
In commonly studied GFP chromophore analogues such as 4-(4-hydroxybenzylidene)-1, 2-
dimethyl-1H-imidazol-5 (4H)-one (PHBDI), the dominant photoinduced processes are cis …

GFP family: structural insights into spectral tuning

AA Pakhomov, VI Martynov - Chemistry & biology, 2008 - cell.com
Proteins homologous to green fluorescent protein (GFP) span most of the visible spectrum,
offering indispensable tools for live cell imaging. Structural transformations, such as …

Reversible photoswitching in fluorescent proteins: a mechanistic view

D Bourgeois, V Adam - IUBMB life, 2012 - Wiley Online Library
Phototransformable fluorescent proteins (FPs) have received considerable attention in
recent years, because they enable many new exciting modalities in fluorescence …

[HTML][HTML] Generation of monomeric reversibly switchable red fluorescent proteins for far-field fluorescence nanoscopy

AC Stiel, M Andresen, H Bock, M Hilbert, J Schilde… - Biophysical journal, 2008 - cell.com
Reversibly switchable fluorescent proteins (RSFPs) are GFP-like proteins that may be
repeatedly switched by irradiation with light from a fluorescent to a nonfluorescent state, and …

Electrochemical fluorescence switching of enhanced green fluorescent protein

Y Yang, S Fan, JA Webb, Y Ma, J Goyette… - Biosensors and …, 2023 - Elsevier
Switchable fluorescent proteins, for which fluorescence can be switched ON and OFF, are
widely used for molecule tracking and super resolution imaging. However, the robust use of …