Evolution and function of chromatin domains across the tree of life
MF Szalay, B Majchrzycka, I Jerković… - Nature Structural & …, 2024 - nature.com
The genome of all organisms is spatially organized to function efficiently. The advent of
genome-wide chromatin conformation capture (Hi-C) methods has revolutionized our ability …
genome-wide chromatin conformation capture (Hi-C) methods has revolutionized our ability …
Genetic and genomic resources for Rubus breeding: a roadmap for the future
Rubus fruits are high-value crops that are sought after by consumers for their flavor, visual
appeal, and health benefits. To meet this demand, production of red and black raspberries …
appeal, and health benefits. To meet this demand, production of red and black raspberries …
15 years of GDR: New data and functionality in the Genome Database for Rosaceae
S Jung, T Lee, CH Cheng, K Buble… - Nucleic acids …, 2019 - academic.oup.com
Abstract The Genome Database for Rosaceae (GDR, https://www. rosaceae. org) is an
integrated web-based community database resource providing access to publicly available …
integrated web-based community database resource providing access to publicly available …
Chromosome-level genome assembly of Ophiorrhiza pumila reveals the evolution of camptothecin biosynthesis
Plant genomes remain highly fragmented and are often characterized by hundreds to
thousands of assembly gaps. Here, we report chromosome-level reference and phased …
thousands of assembly gaps. Here, we report chromosome-level reference and phased …
The chromosome-scale genome reveals the evolution and diversification after the recent tetraploidization event in tea plant
JD Chen, C Zheng, JQ Ma, CK Jiang… - Horticulture …, 2020 - academic.oup.com
Tea is one of the most popular nonalcoholic beverages due to its characteristic secondary
metabolites with numerous health benefits. Although two draft genomes of tea plant …
metabolites with numerous health benefits. Although two draft genomes of tea plant …
The chromosome-level quality genome provides insights into the evolution of the biosynthesis genes for aroma compounds of Osmanthus fragrans
X Yang, Y Yue, H Li, W Ding, G Chen, T Shi… - Horticulture …, 2018 - academic.oup.com
Sweet osmanthus (Osmanthus fragrans) is a very popular ornamental tree species
throughout Southeast Asia and USA particularly for its extremely fragrant aroma. We …
throughout Southeast Asia and USA particularly for its extremely fragrant aroma. We …
A near complete, chromosome-scale assembly of the black raspberry (Rubus occidentalis) genome
Background The fragmented nature of most draft plant genomes has hindered downstream
gene discovery, trait map** for breeding, and other functional genomics applications …
gene discovery, trait map** for breeding, and other functional genomics applications …
A chromosome-scale assembly of the quinoa genome provides insights into the structure and dynamics of its subgenomes
Abstract Quinoa (Chenopodium quinoa Willd.) is an allotetraploid seed crop with the
potential to help address global food security concerns. Genomes have been assembled for …
potential to help address global food security concerns. Genomes have been assembled for …
The chromosome‐scale reference genome of Rubus chingii Hu provides insight into the biosynthetic pathway of hydrolyzable tannins
L Wang, T Lei, G Han, J Yue, X Zhang, Q Yang… - The plant …, 2021 - Wiley Online Library
SUMMARY Rubus chingii Hu (Fu‐Pen‐Zi), a perennial woody plant in the Rosaceae family,
is a characteristic traditional Chinese medicinal plant because of its unique pharmacological …
is a characteristic traditional Chinese medicinal plant because of its unique pharmacological …
Towards smart and sustainable development of modern berry cultivars in Europe
Fresh berries are a popular and important component of the human diet. The demand for
high‐quality berries and sustainable production methods is increasing globally, challenging …
high‐quality berries and sustainable production methods is increasing globally, challenging …