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Naturally occurring modified ribonucleosides
PJ McCown, A Ruszkowska, CN Kunkler… - Wiley …, 2020 - Wiley Online Library
The chemical identity of RNA molecules beyond the four standard ribonucleosides has
fascinated scientists since pseudouridine was characterized as the “fifth” ribonucleotide in …
fascinated scientists since pseudouridine was characterized as the “fifth” ribonucleotide in …
New twists in detecting mRNA modification dynamics
Modified nucleotides in mRNA are an essential addition to the standard genetic code of four
nucleotides in animals, plants, and their viruses. The emerging field of epitranscriptomics …
nucleotides in animals, plants, and their viruses. The emerging field of epitranscriptomics …
Dynamic RNA acetylation revealed by quantitative cross-evolutionary map**
Abstract N 4-acetylcytidine (ac4C) is an ancient and highly conserved RNA modification that
is present on tRNA and rRNA and has recently been investigated in eukaryotic mRNA …
is present on tRNA and rRNA and has recently been investigated in eukaryotic mRNA …
Instrumental analysis of RNA modifications
Y Yoluç, G Ammann, P Barraud, M Jora… - Critical reviews in …, 2021 - Taylor & Francis
Organisms from all domains of life invest a substantial amount of energy for the introduction
of RNA modifications into nearly all transcripts studied to date. Instrumental analysis of RNA …
of RNA modifications into nearly all transcripts studied to date. Instrumental analysis of RNA …
The structural and functional workings of KEOPS
Abstract KEOPS (K inase, E ndopeptidase and O ther P roteins of S mall size) is a five-
subunit protein complex that is highly conserved in eukaryotes and archaea and is essential …
subunit protein complex that is highly conserved in eukaryotes and archaea and is essential …
Pytheas: a software package for the automated analysis of RNA sequences and modifications via tandem mass spectrometry
Mass spectrometry is an important method for analysis of modified nucleosides ubiquitously
present in cellular RNAs, in particular for ribosomal and transfer RNAs that play crucial roles …
present in cellular RNAs, in particular for ribosomal and transfer RNAs that play crucial roles …
Stress-induced modification of Escherichia coli tRNA generates 5-methylcytidine in the variable loop
There has been recent interest in trying to understand the connection between transfer RNA
(tRNA) posttranscriptional modifications and changes in-cellular environmental conditions …
(tRNA) posttranscriptional modifications and changes in-cellular environmental conditions …
Direct sequencing of total Saccharomyces cerevisiae tRNAs by LC–MS/MS
JD Jones, KM Simcox, RT Kennedy, KS Koutmou - Rna, 2023 - rnajournal.cshlp.org
Among RNAs, transfer RNAs (tRNAs) contain the widest variety of abundant
posttranscriptional chemical modifications. These modifications are crucial for tRNAs to …
posttranscriptional chemical modifications. These modifications are crucial for tRNAs to …
Chemical amination/imination of carbonothiolated nucleosides during RNA hydrolysis
Liquid chromatography‐tandem mass spectrometry (LC‐MS/MS) has become the gold‐
standard technique to study RNA and its various modifications. While most research on RNA …
standard technique to study RNA and its various modifications. While most research on RNA …
Commonality and diversity in tRNA substrate recognition in t6A biogenesis by eukaryotic KEOPSs
Abstract N 6-Threonylcarbamoyladenosine (t6A) is a universal and pivotal tRNA
modification. KEOPS in eukaryotes participates in its biogenesis, whose mutations are …
modification. KEOPS in eukaryotes participates in its biogenesis, whose mutations are …