Next-generation data filtering in the genomics era

W Hemstrom, JA Grummer, G Luikart… - Nature Reviews …, 2024 - nature.com
Genomic data are ubiquitous across disciplines, from agriculture to biodiversity, ecology,
evolution and human health. However, these datasets often contain noise or errors and are …

Genomic structural variation is associated with hypoxia adaptation in high-altitude zokors

X An, L Mao, Y Wang, Q Xu, X Liu, S Zhang… - Nature Ecology & …, 2024 - nature.com
Zokors, an Asiatic group of subterranean rodents, originated in lowlands and colonized high-
elevational zones following the uplift of the Qinghai–Tibet plateau about 3.6 million years …

Evolved changes in phenotype across skeletal muscles in deer mice native to high altitude

EJ Garrett, SK Prasad, RM Schweizer… - American Journal …, 2024 - journals.physiology.org
The cold and hypoxic conditions at high altitude necessitate high metabolic O2 demands to
support thermogenesis while hypoxia reduces O2 availability. Skeletal muscles play key …

Comparative genomics reveals putative evidence for high-elevation adaptation in the American pika (Ochotona princeps)

BMF Sjodin, MA Russello - G3, 2022 - academic.oup.com
High-elevation environments have lower atmospheric oxygen content, reduced
temperatures, and higher levels of UV radiation than found at lower elevations. As such …

Local adaptation and future climate vulnerability in a wild rodent

S Marková, HC Lanier, MA Escalante… - Nature …, 2023 - nature.com
As climate change continues, species pushed outside their physiological tolerance limits
must adapt or face extinction. When change is rapid, adaptation will largely harness …

Putative climate adaptation in American pikas (Ochotona princeps) is associated with copy number variation across environmental gradients

BMF Sjodin, DA Schmidt, KE Galbreath… - Scientific Reports, 2024 - nature.com
Improved understanding of the genetic basis of adaptation to climate change is necessary
for maintaining global biodiversity moving forward. Studies to date have largely focused on …

Adaptive structural and functional evolution of the placenta protects fetal growth in high-elevation deer mice

K Wilsterman, EC Moore, RM Schweizer… - Proceedings of the …, 2023 - pnas.org
Environmental hypoxia challenges female reproductive physiology in placental mammals,
increasing rates of gestational complications. Adaptation to high elevation has limited many …

Genomic insights into the mystery of mouse mummies on the summits of Atacama volcanoes

JF Storz, S Liphardt, M Quiroga-Carmona, NM Bautista… - Current Biology, 2023 - cell.com
Our understanding of the limits of animal life is continually revised by scientific exploration of
extreme environments. Here we report the discovery of mummified cadavers of leaf-eared …

To what extent do physiological tolerances determine elevational range limits of mammals?

JF Storz, GR Scott - The Journal of Physiology, 2024 - Wiley Online Library
A key question in biology concerns the extent to which distributional range limits of species
are determined by intrinsic limits of physiological tolerance. Here, we use common‐garden …

Selection and Gene Duplication Associated With High-Elevation Diversification in Pristimantis, the Largest Terrestrial Vertebrate Genus

N Christodoulides, VL Urgiles… - Genome Biology and …, 2024 - academic.oup.com
The genus Pristimantis diversified in the tropical Andes mountains and is the most speciose
genus of terrestrial vertebrates. Pristimantis are notable among frogs in that they thrive at …