The ins and outs of ring-cleaving dioxygenases
Ring-cleaving dioxygenases catalyze the oxygenolytic fission of catecholic compounds, a
critical step in the aerobic degradation of aromatic compounds by bacteria. Two classes of …
critical step in the aerobic degradation of aromatic compounds by bacteria. Two classes of …
Ring-cleaving dioxygenases with a cupin fold
S Fetzner - Applied and environmental microbiology, 2012 - Am Soc Microbiol
Ring-cleaving dioxygenases catalyze key reactions in the aerobic microbial degradation of
aromatic compounds. Many pathways converge to catecholic intermediates, which are …
aromatic compounds. Many pathways converge to catecholic intermediates, which are …
Substrate activation for O2 reactions by oxidized metal centers in biology
MYM Pau, JD Lipscomb… - Proceedings of the …, 2007 - National Acad Sciences
The uncatalyzed reactions of O2 (S= 1) with organic substrates (S= 0) are
thermodynamically favorable but kinetically slow because they are spin-forbidden and the …
thermodynamically favorable but kinetically slow because they are spin-forbidden and the …
Charge maintenance during catalysis in nonheme iron oxygenases
Here, the choice of the first coordination shell of the metal center is analyzed from the
perspective of charge maintenance in a binary enzyme–substrate complex and an O2 …
perspective of charge maintenance in a binary enzyme–substrate complex and an O2 …
Modeling the 2-His-1-Carboxylate Facial Triad: Iron− Catecholato Complexes as Structural and Functional Models of the Extradiol Cleaving Dioxygenases
PCA Bruijnincx, M Lutz, AL Spek… - Journal of the …, 2007 - ACS Publications
Mononuclear iron (II)− and iron (III)− catecholato complexes with three members of a new 3,
3-bis (1-alkylimidazol-2-yl) propionate ligand family have been synthesized as models of the …
3-bis (1-alkylimidazol-2-yl) propionate ligand family have been synthesized as models of the …
Mechanism for catechol ring cleavage by non-heme iron intradiol dioxygenases: a hybrid DFT study
T Borowski, PEM Siegbahn - Journal of the American Chemical …, 2006 - ACS Publications
The mechanism of the catalytic reaction of protocatechuate 3, 4-dioxygenase (3, 4-PCD), a
representative intradiol dioxygenase, was studied with the hybrid density functional method …
representative intradiol dioxygenase, was studied with the hybrid density functional method …
Spectroscopic and electronic structure study of the enzyme− substrate complex of intradiol dioxygenases: Substrate activation by a high-spin ferric non-heme iron site
MYM Pau, MI Davis, AM Orville… - Journal of the …, 2007 - ACS Publications
Various mechanisms have been proposed for the initial O2 attack in intradiol dioxygenases
based on different electronic descriptions of the enzyme− substrate (ES) complex. We have …
based on different electronic descriptions of the enzyme− substrate (ES) complex. We have …
Characterizing the Promiscuity of LigAB, a Lignin Catabolite Degrading Extradiol Dioxygenase from Sphingomonas paucimobilis SYK-6
KP Barry, EA Taylor - Biochemistry, 2013 - ACS Publications
LigAB from Sphingomonas paucimobilis SYK-6 is the only structurally characterized
dioxygenase of the largely uncharacterized superfamily of Type II extradiol dioxygenases …
dioxygenase of the largely uncharacterized superfamily of Type II extradiol dioxygenases …
Luminescent lanthanide sensors
Luminescent lanthanide optical sensors have been developed that utilize ancillary ligands
to enhance detection of a target analyte. In these systems, the lanthanide (ligand) binary …
to enhance detection of a target analyte. In these systems, the lanthanide (ligand) binary …
[HTML][HTML] Dioxetane and lactone pathways in dioxygenolytic ring cleavage catalyzed by 2, 5-dihydroxypyridine dioxygenase
X Ouyang, G Liu, S Ji, S Luo, T Shi, P Xu, YL Zhao… - Chem Catalysis, 2023 - cell.com
Dihydroxypridine dioxygenase (NicX) catalyzes an aromatic N-heterocylic ring opening. We
renew reaction mechanisms of NicX and discover a competitive dioxetane pathway …
renew reaction mechanisms of NicX and discover a competitive dioxetane pathway …