The ins and outs of ring-cleaving dioxygenases

FH Vaillancourt, JT Bolin, LD Eltis - Critical Reviews in …, 2006 - Taylor & Francis
Ring-cleaving dioxygenases catalyze the oxygenolytic fission of catecholic compounds, a
critical step in the aerobic degradation of aromatic compounds by bacteria. Two classes of …

Ring-cleaving dioxygenases with a cupin fold

S Fetzner - Applied and environmental microbiology, 2012 - Am Soc Microbiol
Ring-cleaving dioxygenases catalyze key reactions in the aerobic microbial degradation of
aromatic compounds. Many pathways converge to catecholic intermediates, which are …

Substrate activation for O2 reactions by oxidized metal centers in biology

MYM Pau, JD Lipscomb… - Proceedings of the …, 2007 - National Acad Sciences
The uncatalyzed reactions of O2 (S= 1) with organic substrates (S= 0) are
thermodynamically favorable but kinetically slow because they are spin-forbidden and the …

Charge maintenance during catalysis in nonheme iron oxygenases

ES Traore, A Liu - ACS catalysis, 2022 - ACS Publications
Here, the choice of the first coordination shell of the metal center is analyzed from the
perspective of charge maintenance in a binary enzyme–substrate complex and an O2 …

Modeling the 2-His-1-Carboxylate Facial Triad: Iron− Catecholato Complexes as Structural and Functional Models of the Extradiol Cleaving Dioxygenases

PCA Bruijnincx, M Lutz, AL Spek… - Journal of the …, 2007 - ACS Publications
Mononuclear iron (II)− and iron (III)− catecholato complexes with three members of a new 3,
3-bis (1-alkylimidazol-2-yl) propionate ligand family have been synthesized as models of the …

Mechanism for catechol ring cleavage by non-heme iron intradiol dioxygenases: a hybrid DFT study

T Borowski, PEM Siegbahn - Journal of the American Chemical …, 2006 - ACS Publications
The mechanism of the catalytic reaction of protocatechuate 3, 4-dioxygenase (3, 4-PCD), a
representative intradiol dioxygenase, was studied with the hybrid density functional method …

Spectroscopic and electronic structure study of the enzyme− substrate complex of intradiol dioxygenases: Substrate activation by a high-spin ferric non-heme iron site

MYM Pau, MI Davis, AM Orville… - Journal of the …, 2007 - ACS Publications
Various mechanisms have been proposed for the initial O2 attack in intradiol dioxygenases
based on different electronic descriptions of the enzyme− substrate (ES) complex. We have …

Characterizing the Promiscuity of LigAB, a Lignin Catabolite Degrading Extradiol Dioxygenase from Sphingomonas paucimobilis SYK-6

KP Barry, EA Taylor - Biochemistry, 2013 - ACS Publications
LigAB from Sphingomonas paucimobilis SYK-6 is the only structurally characterized
dioxygenase of the largely uncharacterized superfamily of Type II extradiol dioxygenases …

Luminescent lanthanide sensors

ML Cable, DJ Levine, JP Kirby, HB Gray… - Advances in Inorganic …, 2011 - Elsevier
Luminescent lanthanide optical sensors have been developed that utilize ancillary ligands
to enhance detection of a target analyte. In these systems, the lanthanide (ligand) binary …

[HTML][HTML] Dioxetane and lactone pathways in dioxygenolytic ring cleavage catalyzed by 2, 5-dihydroxypyridine dioxygenase

X Ouyang, G Liu, S Ji, S Luo, T Shi, P Xu, YL Zhao… - Chem Catalysis, 2023 - cell.com
Dihydroxypridine dioxygenase (NicX) catalyzes an aromatic N-heterocylic ring opening. We
renew reaction mechanisms of NicX and discover a competitive dioxetane pathway …