Proximity labeling in plants

SL Xu, R Shrestha, SS Karunadasa… - Annual review of plant …, 2023 - annualreviews.org
Proteins are workhorses in the cell; they form stable and more often dynamic, transient
protein–protein interactions, assemblies, and networks and have an intimate interplay with …

Unlocking protein–protein interactions in plants: a comprehensive review of established and emerging techniques

AF Cuadrado, D Van Damme - Journal of experimental botany, 2024 - academic.oup.com
Protein–protein interactions orchestrate plant development and serve as crucial elements for
cellular and environmental communication. Understanding these interactions offers a …

Mass spectrometric exploration of phytohormone profiles and signaling networks

Y Chen, Y Wang, X Liang, Y Zhang, AR Fernie - Trends in plant science, 2023 - cell.com
Phytohormones have crucial roles in plant growth, development, and acclimation to
environmental stress; however, measuring phytohormone levels and unraveling their …

Characterization of arbuscular mycorrhizal effector proteins

MV Aparicio Chacón, J Van Dingenen… - International Journal of …, 2023 - mdpi.com
Plants are colonized by various fungi with both pathogenic and beneficial lifestyles. One
type of colonization strategy is through the secretion of effector proteins that alter the plant's …

A phase-separated CO2-fixing pyrenoid proteome determined by TurboID in Chlamydomonas reinhardtii

CS Lau, A Dowle, GH Thomas, P Girr… - The Plant …, 2023 - academic.oup.com
Phase separation underpins many biologically important cellular events such as RNA
metabolism, signaling, and CO2 fixation. However, determining the composition of a phase …

Pupylation-based proximity-tagging of FERONIA-interacting proteins in Arabidopsis

Z Lin, D Liu, Y Xu, M Wang, YQ Yu… - Molecular & Cellular …, 2024 - mcponline.org
The plasma membrane-localized receptor kinase FERONIA (FER) plays critical roles in a
remarkable variety of biological processes throughout the life cycle of Arabidopsis thaliana …

Potential application of TurboID-based proximity labeling in studying the protein interaction network in plant response to abiotic stress

K Zhang, Y Li, T Huang, Z Li - Frontiers in plant science, 2022 - frontiersin.org
Abiotic stresses are major environmental conditions that reduce plant growth, productivity
and quality. Protein-protein interaction (PPI) approaches can be used to screen stress …

TurboID reveals the proxiomes of Chlamydomonas proteins involved in thylakoid biogenesis and stress response

E Kreis, K König, M Misir, J Niemeyer… - Plant …, 2023 - academic.oup.com
Abstract In Chlamydomonas (Chlamydomonas reinhardtii), the VESICLE-INDUCING
PROTEIN IN PLASTIDS 1 and 2 (VIPP1 and VIPP2) play roles in the sensing and co** …

Global organization of phenylpropanoid and anthocyanin pathways revealed by proximity labeling of trans-cinnamic acid 4-hydroxylase in Petunia inflata petal …

J Aravena-Calvo, S Busck-Mellor… - Frontiers in Plant …, 2024 - frontiersin.org
The phenylpropanoid pathway is one of the main carbon sinks in plants, channeling
phenylalanine towards thousands of products including monolignols, stilbenes, flavonoids …

Map** of cytosol‐facing organelle outer membrane proximity proteome by proximity‐dependent biotinylation in living Arabidopsis cells

X Bao, H Jia, X Zhang, S Tian, Y Zhao, X Li… - The Plant …, 2024 - Wiley Online Library
The cytosol‐facing outer membrane (OM) of organelles communicates with other cellular
compartments to exchange proteins, metabolites, and signaling molecules. Cellular …